Gene Lcho_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3094 
Symbol 
ID6162695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3425913 
End bp3426578 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID641665869 
ProductMshA biogenesis protein, MshJ-like protein 
Protein accessionYP_001792119 
Protein GI171059770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ACCGCGAACA CCTCGACCGC CAGTGGGCCC AGGCCGCACG CAGCTTCAAT 
CAACGCCCGC AACGCGAACG CGTGCTGCTG ATCACGGCCG CGGCGGTGCT GCTGCTGTGG 
CTGTTCAACC AGCTCTGGCT CAGCAGCCAG TGGCAGCACT GGAGCCAGGC GCGCCAGCAA 
CGCCTGGCCA CAGCCAGCGC CCTGGATACG CTGCGCGACA ACAGCGCCCA GCAGCTCGCG 
CAACAACAGG CCCAACAGCA GCAGGCGCAG ACCGACATCC TGGCCCTGCG CGAGCGACTC 
GACGGGCAGG CCCAGCACCC CACGGCCGGC ACCACCGGCC TGGTCGACGC ACAGGAGATG 
CTGCCGCTGC TGGCCCGCCT GCTCGACCGC GAACACGGCC TGCGCGTGCG CACGCTGCGC 
TCGCTCGGCC AGACCGCCGT GAGTGGGAGC GAAGGCGCCG GCCAGCCGCA GCTCTATCGC 
CACGCGGTCG AGCTGAGCGT CGAAGGCAGC TACGCCGACC TGCTGGGCTA TCTGCAGGCA 
CTCGAGGCGC TGCCGCAGAA GCTGCTGTGG GGCTCGCTGC AGCTCAAGGT CGAGAAGTAC 
CCGCAGGTGC TGCTGACGCT GCGCCTCTAC ACGCTGAGCC AGCAGGCAGG ATGGGTCGAG 
CTATGA
 
Protein sequence
MKIDREHLDR QWAQAARSFN QRPQRERVLL ITAAAVLLLW LFNQLWLSSQ WQHWSQARQQ 
RLATASALDT LRDNSAQQLA QQQAQQQQAQ TDILALRERL DGQAQHPTAG TTGLVDAQEM 
LPLLARLLDR EHGLRVRTLR SLGQTAVSGS EGAGQPQLYR HAVELSVEGS YADLLGYLQA 
LEALPQKLLW GSLQLKVEKY PQVLLTLRLY TLSQQAGWVE L