| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3078 |
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| Symbol | |
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| ID | 6160470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3407558 |
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| End bp | 3409060 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665853 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001792103 |
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| Protein GI | 171059754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCT TCACCTCCCG ACCCCTGCCT GAAGTCGACA ACACCTTGGC CGGCACGGTT
GCGGTCGCGC CGACGCAAGT CGACCCACCT TGGTGGCACC CGCTTCGGTC GACGTTCGTG
TTCCTGCTCG TGCCGGCACT GATCGTGTTC GTCCCGCGGC TGTTCGGCGC CACCCTGCCG
GTGCCGCTGC TCTACGTGCT GGCCGCCGTG TGCGGCGCCA TCATGGCGGT GCGCGCCCTG
TCGAACCCTG AACTCCTGCT GGCCACCTTC ATCCTCTACC TGCCCTTCAG TCGCACCTAC
GCCGCAGCGA TCGCCCCGGG CATCAATGGC ACCAACGTGC TCTACGCGCT GGTCATCGTG
GCGTGGATCG CCACCGTCGT GCGCGAGAAA CGGCCGTTCT TCGTCGCGAT GCCGTTCAGC
CGGCTGGTCA CGATCTGGGC TGCCATCAGC ATCCTTTCCG TGTTCACGGC CATGTCGACC
ATGGGCGTCT CGTACATCAC GACAAGCCGT CTGCCGCAGG TCAAGGCCTG GTGTGATCAG
TTCTTCGTGT TCTTCGCGAT GCTCAACCTG ATCCGCAATG GCGCGGCGGC GCGTCGCATG
GCCGTCTACA TGATGCTCGG AACGCTGCTG GTGCTGATCT CGGGCTTCTT CGAGTGGCAG
GACAAGCGCT ACTACGACCG CATCGACAAG GCGCGCCTGC TCGGCCCCCA GCAGCAGCCC
AACGACTTCG GCGCCTTCAT CGTCTACGGG TTCGGGATTC CCGGCGCACT GATCCTGTGC
CACATGTGGC GGGTGCGGAC CTGGCTGCTG GCCACACCGG TGCTCTACAT CGCCGCTCGC
GTGTTGCTGG CCACCTTCTC GCGTGGCGCC GTGCTCGGCA TGGGCGCCCT GGCCGCCGCG
CTGCTGCTGG TGCGCGGCCG CATCCTGGCC GCGTCGATTG CCCTGATCGG AGCCCTCGTG
GTGCAGGTCG CACCCGAAGT CCTGCCTGCA TCGCTGAGCG CGCGCATGTC GCAAACCACC
AGCGAAAGCG ATGGCGAGCT CGACAAGAGC TCTCAGACGC GTCTGGTCCT GTGGGATGCG
GCCATCCAGA TCACGCTCGA CTATCCGATC TTCGGCACCG GCTTTGCGAC GTTCCCGAAG
ATCAAGGACC AGTACGCGTC GATACCGACG GTCGAATCCG ACAACCACAA CATGTTCCTG
TTCATCTGCT CGCAGATGGG ATTGCCGGCG TTGTTTGTCT TCCTGTTGAT CTTTGCCCGC
ATGGCCTACA TCGGAGCGTG CGTGCACAAG CATGAGCACG AACCCTTCGG CAAGGCCATC
GGGCTCGGCG CCGTGGGCAC GGCCGCCGGT ACGCTGGCCA TCAACATGTT CGGCTCGCGC
ATGACCGATG CCGAGGTGAT GGCCTATGTG TGGATCACGA TCGCCGTGCT GTCGCACCTG
TGGCGAGAAA ACCAGGCCCG GCAAGCCGGG CCTGCCGAGC CGCCGGCTCA GGTGACGCGG
TAG
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| Protein sequence | MSAFTSRPLP EVDNTLAGTV AVAPTQVDPP WWHPLRSTFV FLLVPALIVF VPRLFGATLP
VPLLYVLAAV CGAIMAVRAL SNPELLLATF ILYLPFSRTY AAAIAPGING TNVLYALVIV
AWIATVVREK RPFFVAMPFS RLVTIWAAIS ILSVFTAMST MGVSYITTSR LPQVKAWCDQ
FFVFFAMLNL IRNGAAARRM AVYMMLGTLL VLISGFFEWQ DKRYYDRIDK ARLLGPQQQP
NDFGAFIVYG FGIPGALILC HMWRVRTWLL ATPVLYIAAR VLLATFSRGA VLGMGALAAA
LLLVRGRILA ASIALIGALV VQVAPEVLPA SLSARMSQTT SESDGELDKS SQTRLVLWDA
AIQITLDYPI FGTGFATFPK IKDQYASIPT VESDNHNMFL FICSQMGLPA LFVFLLIFAR
MAYIGACVHK HEHEPFGKAI GLGAVGTAAG TLAINMFGSR MTDAEVMAYV WITIAVLSHL
WRENQARQAG PAEPPAQVTR
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