| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3069 |
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| Symbol | |
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| ID | 6162724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3395990 |
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| End bp | 3397270 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665844 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_001792094 |
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| Protein GI | 171059745 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTA TTGCTGTCGT GGGTTTGGGC TATGTCGGCC TGCCCCTTGC CGTCGAGTTC
GGCAAGAAGC ACCGCACCAT CGGTTTTGAC CTGTCGCAGG CCAAGATCGA TGCGTACAAG
CGCCATGTCG ATCCGACAGG CGAGGTCAGC ACCGAGTTGC TGCAGTCGTC GACCGGGCTC
GAGCCCACGA CCGACGCCTC GGCGCTGCGC GAGGCCGATT TCGTGGTGGT CGCCGTGCCG
ACGCCGGTCG ACGACGCTCA CAACCCCGAC TTCAGCCCGC TCGTGGGCGC CAGCCGTTCG
GTCGGGCGCA ACCTCAAGCC GGGTGCGATC GTGGTCTATG AGTCGACCGT CTACCCCGGT
GCGACCGAAG AGGTGTGCAT CCCGATCCTG GAAAAAGAGT CCGGCCTCAA GTGGCAGAAG
GACTTCTGGG TCGGCTATTC GCCCGAGCGC ATCAACCCGG GCGACAAGCT GCACACGCTG
ACCACCATCA CCAAGGTGGT GTCGGGCGAC TGCCCCGAAA CCTTGGCCAA GGTGGCCGAT
GTCTACGGCA GCATCATCAC CGCCGGGGTC TACAAGGCCA GCTCGATCAA GGTGGCCGAG
GCCGCCAAGG TGATCGAGAA CACCCAGCGC GACCTCAACA TCGCGCTCGT CAACGAGCTG
TCGCTGATCT TCCACCGCAT CGGCATCGAC ACCACCGAGG TGCTGCAGGC TGCGGGCACC
AAGTGGAACT TCCTGCCGTT CCGCCCGGGC CTGGTCGGCG GCCATTGCAT CGGCGTCGAT
CCGTACTACC TGACCAACAA GGCCGAACGG ATGGGCTATC ACCCGCAGGT GATCCTGGCC
GGGCGGCGCA TCAACGACGG CATGGGCAAG TTCATCGCCG AGCAGACCGT CAAGGAGCTG
ATCCGCCTGG GCGCGCCGGT CAAGGGTGCG CACGTGATCG TGCAGGGCCT GACCTTCAAG
GAAAACTGCC CCGACCTGCG CAACTCCAAG GTCATCGACG TGATCCGCGA GCTCGAGACC
TACGGCGTGA CGGTGCACGT GCACGACCCG GTGGCCGACC CGGCCGAGGC GATGCACGAA
TACGGCGTCG AGCTGGTCGA GTGGGCGCAC CTGCCCCGCG CCAACGCGAT CGTCGCGGCG
GTGGCCCACG ATGAACTGGC GCATCGCCCG ATCGACGCCC TGCTGACCAA GCTGGCGCCG
GGCGGCCTGT ACGTCGACGT CAAGGCCCAG GCCGACCGTG CCGCGCTGGA GGCACGTGGC
ATCCACGTGT GGCGCCTGTG A
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| Protein sequence | MTTIAVVGLG YVGLPLAVEF GKKHRTIGFD LSQAKIDAYK RHVDPTGEVS TELLQSSTGL
EPTTDASALR EADFVVVAVP TPVDDAHNPD FSPLVGASRS VGRNLKPGAI VVYESTVYPG
ATEEVCIPIL EKESGLKWQK DFWVGYSPER INPGDKLHTL TTITKVVSGD CPETLAKVAD
VYGSIITAGV YKASSIKVAE AAKVIENTQR DLNIALVNEL SLIFHRIGID TTEVLQAAGT
KWNFLPFRPG LVGGHCIGVD PYYLTNKAER MGYHPQVILA GRRINDGMGK FIAEQTVKEL
IRLGAPVKGA HVIVQGLTFK ENCPDLRNSK VIDVIRELET YGVTVHVHDP VADPAEAMHE
YGVELVEWAH LPRANAIVAA VAHDELAHRP IDALLTKLAP GGLYVDVKAQ ADRAALEARG
IHVWRL
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