| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3058 |
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| Symbol | |
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| ID | 6163112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3383327 |
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| End bp | 3385315 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665833 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001792083 |
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| Protein GI | 171059734 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.024597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGT CCCCGATCGA CGCCGACGCG CACGGCCACC CGAGCCAGTT CGCGCTGCTG
CGCCAGCGCC GTTTCGCGCC GTTCTTCTGG ACCCAGTTCC TCGGCGCGGC CAACGACAAC
CTGTTCAAGT TCGCTTTCAC GGTGCTGGTC ACCTACCAGC TGCAGCTCGC CTGGCTGCCG
CCGGCGATGG CCGGGCTGGT GATCGGCGCG CTGTTCATCC TGCCGTTCCT GCTGTTCTCG
GCCACCAGCG GCCAGCTGGC CGACAAGTTC GACAAGGCCC GCGTGATGCG GCTGGTCAAG
TCGCTCGAGA TCGCCATCAT GGCGCTGGCC GGCTGGGGTT TCATGCACCC GGACGCCGAC
ATCAAGGTGC CCGTGCTGCT GGCCTGCGTG TTCCTGATGG GGCTGCACTC GACGCTGTTC
GGCCCGGTCA AGTTCGCCTA CCTGCCCCAG CACCTGAGCG AGCGCGAACT CACCGGCGGC
AACGGCATGG TCGAGATGGG CACCTTCGTG GCCATCCTGC TCGGCAACGT CGCCGGCGGC
GTGCTGATCG CGCTGCCGCA GGTCGGCCCG ACGGCGGTGG CGATGGCCTG TTTCGGCGTC
GCCGTGATCG GCCGGCTCAC CGCGCAGGCG GTGCCTGCCA CGCCCGCCAC CGATCCCGGC
CTGCGCATCA ACCTCAACCC GGTGAGCGAG ACCTGGCGCA ACCTCAAGCT CGCGCACGGC
AACATCGTCG TCTTCCGGTC GCTGCTCGGC ATCTCGTGGA TGTGGTTCTT CGGCGCGGTG
TTCCTGAGCC AGTTCCCGTC GTTCGCCAAG GAGGTGCTGC ACGGCAGCGA GCAGGTGGCG
TCGCTGCTGC TGGTGGTGTT CTCGATCGGC ATCGGCATCG GCTCGCTCTT GTGCGAGATG
CTGTCGCGCC GCCATGTCGA GATCGGCCTG GTGCCGCTGG GCGCGATCGG CATGAGCGTG
TTCTCGATCG ACCTCTACTT CGCCACCCAG GCGCTGCCGC CGCTGGCCGA CGGCGTGGCG
CTGACGGTCG GGCAGTTCCT GTCGCTGTCG TGGTACTGGC GCGTGATGGC CGACCTAGCG
CTGCTGGCGC TCGCGGCGGG CATCTACAGC GTGCCGATGT ACGCGCTGAT CCAGATCCGC
TCGCCGGCCA GCCACCGCGC CCGCATCATC GCGGCCAACA ACATCCTGAA CGCCCTGTTC
ATGATCGCCA GCTCGCTGAT CGCAGGCGCC CTGCTGGCGT CGGGCGCCAG CATCGGCCAG
ATCTTCCTGT TCACCGGCCT GGCCAATGCG GTGGTGGCGA CCTACATCTT CCTGCTGGTG
CCCGAGTACC TGCTGCGTTT CGTCGCCTTC ATCGCCACCC GGCTGATCTA TCGGCTGCGC
CTGCGCGGCG ATCAGAACCT GCCCGCCAGC GGCGCGGCCA TCATCGTGGC CAACCACGTC
AGCTTCGTCG ACGCGGTGGT GCTGATGGCG GTCAGCCCGC GGCCGATCCG CTTCATCATG
GACCACCGCA TCTTCGCGGT GCCGGTGCTC GGCTGGCTGT TCCGGCTCGG CAAGGCGATC
CCGATCGCGC CGCAAAAAGA AGACCCCAAG CTCTACGAAC AGGCCTTCGC CCAGGCCCGC
CAGGTGCTGA CCGACGGCGA CCTGCTTGCG ATCTTTCCCG AAGGCGGCAT CACCCGCGAT
GGCCTGCTGC AGCCCTTCAA GGGCGGCATC ATGAAGATCC TGGCCGAGTT GCCCGCGCCG
GTGGTGCCCG TGGTGCCGAT CGCGCTGTGC AACCTCTGGG GCTCGTTTTT CTCGCGCATC
GAAGGCGGTC AGGCGATGGC ACGGCCGTTC CGCCGCGGGC TGTTCAGCCG GGTCGAGGTG
ATCGTCGGTG CGCCGCTGGC GGCCGCGCAG GTCAGCCCGG AACTGCTGCA GTCGCAGGTG
CAGGCCTTGC TCGACAGCGC CGGCAGCGTG CCCGCGACCG CCTCGCTCGC CAGCCCGCCG
CTGCGGTGA
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| Protein sequence | MPQSPIDADA HGHPSQFALL RQRRFAPFFW TQFLGAANDN LFKFAFTVLV TYQLQLAWLP
PAMAGLVIGA LFILPFLLFS ATSGQLADKF DKARVMRLVK SLEIAIMALA GWGFMHPDAD
IKVPVLLACV FLMGLHSTLF GPVKFAYLPQ HLSERELTGG NGMVEMGTFV AILLGNVAGG
VLIALPQVGP TAVAMACFGV AVIGRLTAQA VPATPATDPG LRINLNPVSE TWRNLKLAHG
NIVVFRSLLG ISWMWFFGAV FLSQFPSFAK EVLHGSEQVA SLLLVVFSIG IGIGSLLCEM
LSRRHVEIGL VPLGAIGMSV FSIDLYFATQ ALPPLADGVA LTVGQFLSLS WYWRVMADLA
LLALAAGIYS VPMYALIQIR SPASHRARII AANNILNALF MIASSLIAGA LLASGASIGQ
IFLFTGLANA VVATYIFLLV PEYLLRFVAF IATRLIYRLR LRGDQNLPAS GAAIIVANHV
SFVDAVVLMA VSPRPIRFIM DHRIFAVPVL GWLFRLGKAI PIAPQKEDPK LYEQAFAQAR
QVLTDGDLLA IFPEGGITRD GLLQPFKGGI MKILAELPAP VVPVVPIALC NLWGSFFSRI
EGGQAMARPF RRGLFSRVEV IVGAPLAAAQ VSPELLQSQV QALLDSAGSV PATASLASPP
LR
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