| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3044 |
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| Symbol | |
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| ID | 6161571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3361205 |
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| End bp | 3362872 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665819 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792069 |
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| Protein GI | 171059720 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000101024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGGTG AACTGCGCAG CGCCCACCAC GACGTCGTGA TCGGCGCGCC GCGCGACCTC
GTCGCCACGC GCCGCCCGGC GCTGCTTCAG CGCAGTGACG ACGACTTCAT CGGCGCCACG
CTCGAAGCGC TGCGCGCACC GGCCGGCCGC GCGGCCTTGC GCGCCAAGCT CGCCCGTGCC
ACCGACGCAC AGGGCCGGCT CAAGCTGTTC CAGCCGATCC AGCGCCAGTT CCACGTCGCG
CTGATCGAGG CCTGGTGCGA CACCCCCGGC GCGCCGCGCA TCGACCCCAA GCGGGTCGAT
GCCGCCGGCC TGGTGGTGCG CCGACTCGGG CCTCAGGGCG CCGAAGGCTG GATGCACGCC
AACGGCCAGG TGCGCGGCTG GGTGCCGCTC GCACGCATCG GCGGCGAGAC GGCCGAACCG
CAGGCCGCCG CACGCTTGAC GGCGCGACTG ACCGGCGTGG CGCAGATCGA TCGGCAGCTC
AGCCTGCACG CCCGCGAGGA CGCTGACCAC CCGCTCGAAG AGCAGATCAG CGGCCTCTAT
CTGGCGCCGC CCGACGTCAA CGCCGACGCC GGCAAGACGC TGTTCTACGG GCTGGTGCCG
ACCACCAGCA GCGAGCTGAG CGACGTGCCG CCCGCACCCA CAGGCGACGA CGGTTTCGGC
GCCGGCTCGG ACGCCTTCCG CAACCACCTG GTCGAGGCGC TGCGCGGCGA CGCGATGGAC
TTGCCCTTCC CCGGCGATCT GCTCGTGCCC GGCTGGTTCG AGGCCAGCGA ATCACCCGGC
GTACGCCCAC CCGACGGCGT CACGCAAAAC CAGTTCAACC TGCTGCAACA GGACGTGCGC
ACCGCGGCCG GCGCGACCGC CTTGCGCATG CAGCGTTTCC TGCTGTTCCT GCGCCAGATC
GCGGGCGAGT TCAATGCCTT CGCGGGTGGC AACGAAGTCA AGACGCTGAA GACGATCCTT
GCCTCCATCC AGCTGCCACT GGTGCTGCGC CCGGATGAAA AGGTCGTGCG CTTCGTCCGG
GCCGATCAGT TCCTCGCCAA GGCCAGCGCG ATCCTGCTGG AGCAGACCGC CAGCGCTAGC
GTCGTCGAGA TGCCGGCTTA CTGGCCCGCG CTGGCCCCGG CCGACGCGAC CCGCCTGAAG
AACGCGCTGC ACCAGGCGCT GCAAGCCCGG CTGGCCGCGA TGCAGACCCA GGCCGGCCGC
TACGACGAGC CGACCGCGCG CTACAGCGTG CGCGCCTTCG TGCGCCTCAA GCCCGAAGGC
CACTGCCCCG CGCGCACCGT CTGGAGCGAG CCGAGCGAGC CCTTCGTGAT CGCGCCCTGG
TACGAAGGCG GCGGCGCGCC GCCGGTGCAG ATCCGCCTGC CCGATGCGTC CGACCGCACG
CTGCTCAAGG CGCTCAAACC CAACGTCGCC TTCATCGTGC CGCCGTCGAT GCAGAACCTG
CTGTCGGGCA AGGCGAAGGA TCTGCTCGAA GGCAAGGGCA GCGTCGGCAC GGCGGGCTTG
AGCTGGATCT GCAGCTTCAA CATACCGGTG ATCACGATCT GCGCCTTCAT CGTGCTGAAC
ATCTTCCTGA CGCTGTTCAA CTTGGTGTTC GGCTGGCTGT TCTTCATCAA GATCTGCATC
CCGTTCCCGA AGCTGGGCAA CAAGCCACCC GGAGGGTCTT CACCATGA
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| Protein sequence | MSGELRSAHH DVVIGAPRDL VATRRPALLQ RSDDDFIGAT LEALRAPAGR AALRAKLARA
TDAQGRLKLF QPIQRQFHVA LIEAWCDTPG APRIDPKRVD AAGLVVRRLG PQGAEGWMHA
NGQVRGWVPL ARIGGETAEP QAAARLTARL TGVAQIDRQL SLHAREDADH PLEEQISGLY
LAPPDVNADA GKTLFYGLVP TTSSELSDVP PAPTGDDGFG AGSDAFRNHL VEALRGDAMD
LPFPGDLLVP GWFEASESPG VRPPDGVTQN QFNLLQQDVR TAAGATALRM QRFLLFLRQI
AGEFNAFAGG NEVKTLKTIL ASIQLPLVLR PDEKVVRFVR ADQFLAKASA ILLEQTASAS
VVEMPAYWPA LAPADATRLK NALHQALQAR LAAMQTQAGR YDEPTARYSV RAFVRLKPEG
HCPARTVWSE PSEPFVIAPW YEGGGAPPVQ IRLPDASDRT LLKALKPNVA FIVPPSMQNL
LSGKAKDLLE GKGSVGTAGL SWICSFNIPV ITICAFIVLN IFLTLFNLVF GWLFFIKICI
PFPKLGNKPP GGSSP
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