Gene Lcho_3034 details

Gene Information

• Locus tag: Lcho_3034
• ID: 6162471
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 3352339
• End bp: 3352938
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641665809
• Product: hypothetical protein
• Protein accession: YP_001792059
• Protein GI: 171059710

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.00100979
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCCAACG TCCGGGCAGT TCATTCGGTG GGGCAATCCA TCGTGACCTA TCTGCGCAAC 
ACCTATCCGA ACAACCTCGG GGGCTCGCCG ATGCCGGCCT GCGAGTTCGC GCTGCTGTCG 
TCAGGCGAGC TGGCCGCCGC GGTCGAGGAA GGCACGCGGA TCTCGCTCTA CCTCTACCGC 
GTCACCGTCA ACGAACACAA CCGCCAGCAG CGCCCCGACC GCATGACGCC CGAACAGCAG 
GCGCCGCTGG GCCTTGATCT TCACTACCTG CTGACGGCCT GGTCGGCCAC CGCGCAGGAG 
GAGCAGATCA CGCTGACCTG GGCGCTGCGC CAGCTCTACC TGCACCCGAT CCTCGACGCC 
TCGTCGCTCT CGCCCGAGGC CGACTGGGCG CCCGACGAGG TGATCCAGGT GATCCCGTCC 
GAGCTGGCCA ACGAGGACAT GATGCGCATC TGGGACGCAC TCGAGCCGGC CTACCGGCTG 
TCGGTGTCGT ACATCGCGCG GTTGGTGCGC ATCGACCCCG ACGCCGTCAC CGAAGGCCGC 
CCGGTGGTGG CGCGCCGGCT CGGCCTGGGC TCGCTCACCG GCACCGAGGG CACGCCATGA 

 

Protein sequence

MANVRAVHSV GQSIVTYLRN TYPNNLGGSP MPACEFALLS SGELAAAVEE GTRISLYLYR 
VTVNEHNRQQ RPDRMTPEQQ APLGLDLHYL LTAWSATAQE EQITLTWALR QLYLHPILDA 
SSLSPEADWA PDEVIQVIPS ELANEDMMRI WDALEPAYRL SVSYIARLVR IDPDAVTEGR 
PVVARRLGLG SLTGTEGTP