| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3013 |
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| Symbol | |
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| ID | 6160856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3327570 |
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| End bp | 3329243 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665788 |
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| Product | 5'-nucleotidase domain-containing protein |
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| Protein accession | YP_001792038 |
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| Protein GI | 171059689 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCA CCCGCCTGAT CTGCCCGCCC CTGATCGCCG CCCTCGCCGC CTTGTCCGGC
TGCGGCCTGT TCGGCCCGCG CGAGGCCCCG CCGGTGGCGG TCAAGGTGCT GGCGATCAAC
GACTTCCACG GCAACCTGAA GCCCCCGCTG GGCGGCGTGC GCATCCGCGA TCCGCAGGAT
GCGGGCAAGA CCGTCAGCGT CCCCGCCGGC GGCGCCGAGC ACCTGGCCAG CGCGCTGCGC
GAGGCCCGCG CGAAGAACCC GAACCACATC TTCGTCGCCG CCGGTGACCT GGTGGGCGCC
AGCCCGCTGC TGTCGGCGCT GTTCCACGAC GAGCCGACGA TCGAGGCGCT CGGCCTGATG
GGCCTGGAGG CCAGCGCGGT CGGCAACCAC GAGTTCGACC GCGGCGCGGC CGAGCTGCTG
CGCCAGCAGA ACGGCGGCTG CCACCCGAAG GACGGCTGCC GCGGCCCGCA GGACTTTCGC
GGCGCGCGCT TCCAGTACCT GGCCGCCAGC ACGATCGACA CGCGCACCGG CCGGACCTTG
CTGCCGGCCT ATCACGTCAA GCGTTTCGAG GGCATCCCGG TGGCCTTCGT CGGCCTGACG
CTGGCCGGCA CGCCGCGCAT CGTGACGCCC GCCGGCGTGG CCGGGCTCGC GTTCCGCGAC
GAGGCGCAGA CCGTCAACGC GCTGGTGCCG CAGCTGCGCG CGCAGGGCAT CGAGGCGATC
GTGGTGCTGA TCCACGAGGG CGGTTTCCCG AGCGGCGACC ACAACGAGTG CCCGGGCATC
TCGGGGCCGA TCGTGGGCAT CGTCGAGCGG CTCGACCCGG CCGTCGACCT GGTGGTCAGC
GGCCACACCC ACCGCGCCTA CAACTGCCGC ATCGGCGGGC GGCTCGTCAC CAGCGCCGAC
AAGTACGGCA CCGTGCTGAC CGAGATCGAC CTGCAGCTCG ACCCGCGCAG CGGCGACGTG
CTGCAGGCGC GCGCCGACAA CCTGATCGTG CGCACCGACC GCTACGCCCG TGACGCCGAA
CAGAGCCGCC TGATCGCCCG CTACGAAACG CTCGCCGCGC CGCTGGCCGG GCGGGTGGTC
GGCTACATGA GCGGGCGCCT GACACGCGAG GAAAACGCCG CCGGCGAATC CGTCATCGGC
CAGGTGGTGG CCGACGCCCA GCTGATGGCC ACCGAACACC CGCTCAGCGG CGGCGCCCAG
ATCGCGCTGA TGAACCCGGG CGGCCTGCGC GCCGACCTGG CCGCGGGCGA CGGCGGCGTG
GTGCGCTACG AGGACATCTT TGCGGTGCAG CCGTTCTACA ACAACCTCGT CACGCTCTCG
CTGACCGGCG CGCAGCTGCG CCAGCTGCTC GAACAGCAGT GGCTCGACCA GCCCCGGCCG
CGCATCCTGC AGGTCTCGCG CGGTTTCAGC TACAGCTGGG ACGCCAGCCG CCCGCCCGGC
CAGCGCGTGC GGGCCGACAG CCTGCGGCTC AACGGTCAGC CGATCGGGGC GGACACGCGC
TACCGGGTGT CGGTCAACAG CTTCCTGGCC TCGGGCGGCG ACGGGTTCTC GGTCTTCAGG
CAGGGCCTGG AGCCGGTCAC CGGGATGATG GACGTCGACG CCTTCGAAGC GTATTTCCGC
AGCCACGAGC GGCTTGACGT ACGTCACGAC GAACGCATCC GCCGCCTGCC CTGA
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| Protein sequence | MRITRLICPP LIAALAALSG CGLFGPREAP PVAVKVLAIN DFHGNLKPPL GGVRIRDPQD
AGKTVSVPAG GAEHLASALR EARAKNPNHI FVAAGDLVGA SPLLSALFHD EPTIEALGLM
GLEASAVGNH EFDRGAAELL RQQNGGCHPK DGCRGPQDFR GARFQYLAAS TIDTRTGRTL
LPAYHVKRFE GIPVAFVGLT LAGTPRIVTP AGVAGLAFRD EAQTVNALVP QLRAQGIEAI
VVLIHEGGFP SGDHNECPGI SGPIVGIVER LDPAVDLVVS GHTHRAYNCR IGGRLVTSAD
KYGTVLTEID LQLDPRSGDV LQARADNLIV RTDRYARDAE QSRLIARYET LAAPLAGRVV
GYMSGRLTRE ENAAGESVIG QVVADAQLMA TEHPLSGGAQ IALMNPGGLR ADLAAGDGGV
VRYEDIFAVQ PFYNNLVTLS LTGAQLRQLL EQQWLDQPRP RILQVSRGFS YSWDASRPPG
QRVRADSLRL NGQPIGADTR YRVSVNSFLA SGGDGFSVFR QGLEPVTGMM DVDAFEAYFR
SHERLDVRHD ERIRRLP
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