Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3012 |
Symbol | |
ID | 6160855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3326021 |
End bp | 3327448 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641665787 |
Product | histidine kinase |
Protein accession | YP_001792037 |
Protein GI | 171059688 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGC CCGAGCCTCT GACGGTGCCC GGCCGAGCCC GCAGCCACTC GCTGCAGGGC CGGCTGGTGG CGCTGGTGCT GTCGGTCGTC ACCGCCGCGT GGCTGATCGC GGCGCTGCTG ATCTGGCGCG ACACCGAACA CGAGCTCGAA GAGCTGCTCG ACGGCCATCT GGCGCAGGCG GCGGCGCTGC TGGTGGCGCA GCAGTCACCC GAGTTCGACG ACGACGAGCT CGAGGACGCG CCCAACCTGT ACCGCTATGC ACCACGGGTG GCGTTCCAGT TCTGGCACGA GGGCGAGCTG GTGCTGCGCT CGGCCAATGC GCCGGCCGAG CCGATGTCGA CGCTGATACG CGGCATCGAG ACCCGCCGCA TCGGTGACGA CGCCTGGCGG GTGTTCGCCA CCCGCGGCAA GGAAAGCGAC GTGCAGGTGT TCGTCGGCGA GCGCATCCAG GCGCGCGAGG ACATCCTGGG CGCGCTGATC CGCAACCTGT TCATGCCGCT GGCGCTGGTG CTGCCGCTGC TGGCGCTGGC GCTGTGGTGG GCGGTGCGGG TGGGCCTGGC GCCGCTGCGC CAGCTCGCCG CGCTGCTGCG CCAGCGCGAG CCGCAGGCGC TCGACACGCT GCACCTGCCG GCGCCTTTTG TCGAGATGGC GCCGCTGCTC GAGGCGCTGA ACCGGCTGTT CGAGCGCATC GCGATGCTGC TCGAACAGGA GCGCCGCTTC AACGCCGACG CAGCCCACGA GCTGACCACG CCGATCGCCG CCATCCGCGC CCAGGCCCAG GTGGCGCTGC GCGAGAGCGA TGCCGAGCAG CGCCAGCACG CCCTGCGCGC CACGCTGTCG GGCTGCGACC GCGCCAGCCA CCTGGTGGCG CAGCTGCTGC AGCTGGCGCG CATCGAAAGT GCCGACGCCG ACGAGCGCGC GGCACAGGCG CCGCTCGACC TGAGCGCCCT GACCCGCAGC GTGCTGGCCG ACCTGAGCCC GGCGGCGCGC GCACGCGGGC AGTCGATCGA GCTCGACGCA CCGCCGCACT GCCAGGCCCG CGGCGACGCC GCGCTGCTGG GCGTGCTGAT GCGCAACCTG GTCGACAACG CGATCCGCTA CAGCCCGCCG GGCACGCCGA TCCTGGTCAC GATCGGCGAC GGCACGGACG AACCGGGCGG CACCCGCGGC CGCGCGCCGA GCTGGCAGAT CGACGACGGC GGCCCCGGCC TCGCCGACGC CGAGCTGGCG CGGCTGGGCG AGCGTTTCTT CCGCGTGCTC GGCAACGATG CGCCGGGCAG CGGGCTGGGC TGGTCGATCG TGCGGCGCAT CGCCCGCGCG CTGGGGCTGA GCGTCGAGGT CGAGCGCTCG CGCCGGCTCG GCGGCCTGGC GGTGCGGCTG CGCTGGCCCG AGCCGGGCGC CCGACCGGGT GGGAGCGTGG CGCGCTGA
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Protein sequence | MAAPEPLTVP GRARSHSLQG RLVALVLSVV TAAWLIAALL IWRDTEHELE ELLDGHLAQA AALLVAQQSP EFDDDELEDA PNLYRYAPRV AFQFWHEGEL VLRSANAPAE PMSTLIRGIE TRRIGDDAWR VFATRGKESD VQVFVGERIQ AREDILGALI RNLFMPLALV LPLLALALWW AVRVGLAPLR QLAALLRQRE PQALDTLHLP APFVEMAPLL EALNRLFERI AMLLEQERRF NADAAHELTT PIAAIRAQAQ VALRESDAEQ RQHALRATLS GCDRASHLVA QLLQLARIES ADADERAAQA PLDLSALTRS VLADLSPAAR ARGQSIELDA PPHCQARGDA ALLGVLMRNL VDNAIRYSPP GTPILVTIGD GTDEPGGTRG RAPSWQIDDG GPGLADAELA RLGERFFRVL GNDAPGSGLG WSIVRRIARA LGLSVEVERS RRLGGLAVRL RWPEPGARPG GSVAR
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