| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3007 |
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| Symbol | |
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| ID | 6160850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3322464 |
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| End bp | 3323525 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665782 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001792032 |
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| Protein GI | 171059683 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT TGCAGGACCT GCTTCACATC GACCGGCCGA TCATCCAGGC GCCCATGGCC
GGCGCCCAGG GCAGCGCGAT GGCGATCGCC GTCAGCGAGG CCGGCGGGCT GGGCTCGCTG
CCGTGCGCGA TGCTCACGCC GGCCGCCCTG CGCACCGAGC TGACGGCGAT CCGTGCCGCC
ACGCAGCGGC CGTTCAACGT CAACTTCTTC TGCCACCGCC CGCCGGTGCA TGACGCCGCG
CGCGAGGCCG CCTGGCAGGA CACGCTCGCG CCGTATTACC GCGAGTTCGG TCTCGACCCC
GCCGCGATCC AGCCCGGCCC GGGCCGCGCG CCCTTCAACG CCGAGTTCGC CGCGGTGCTG
GCCGAGTTCC GCCCGCCGGT GGTGAGCTTC CACTTCGGCC TGCCCGACGC CGCGCTGCTG
GCGCCGATCA AGGCCTGGGG CGCCAAGGTG CTGTCGTCGG CCACCACGGT CGACGAGGCG
CGCTGGCTGG TGCAGCACGG CGCCGACGCG GTGATCGCGC AGGGCCTGGA GGCCGGCGGT
CACCGCGGCC TGTTCCTCAG CGATGACAGC AACGACATCA GCACCCAGGT CGGCACCTTC
GCGCTGCTGC CGCAGATCGT GCGCGCCGTG CCGGTGCCGG TGATCGCCGC CGGCGGCATC
GCCGATGCCT CCGGCGTGGC CGCGGCGCTG GCGCTGGGCG CGGCGGGCGT GCAGGTCGGC
ACCGCCTACC TGCTGTGCCC CGAGGCCAGC ATCAGCGCCT TGCACCGCGC CGCGCTCGCC
AGCCCGGCGG CGGCGCACAC GGCGCTGACC AACCTGTTCA CCGGCAGGCC GGCGCGCGGC
ATCGTCAACC GGCTGATGCG CGAGTGCGGA CCGATCAGCG CGCTGGCGCC GGCCTTCCCG
CTCGCCACCG CCGCGATCGC GCCGCTGCGC GCGGCCGCCG AGGCGCGTGG CAGCGCCGAT
TTCACGCCGC TGTGGGCGGG CCAGAACGTC TCGGGCTGCC AGGCGCTGCC GGCCGGTGAA
CTGACGCGGC GACTGTGCCC CGTCGCCGAC GAGAAGGCCT GA
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| Protein sequence | MTALQDLLHI DRPIIQAPMA GAQGSAMAIA VSEAGGLGSL PCAMLTPAAL RTELTAIRAA
TQRPFNVNFF CHRPPVHDAA REAAWQDTLA PYYREFGLDP AAIQPGPGRA PFNAEFAAVL
AEFRPPVVSF HFGLPDAALL APIKAWGAKV LSSATTVDEA RWLVQHGADA VIAQGLEAGG
HRGLFLSDDS NDISTQVGTF ALLPQIVRAV PVPVIAAGGI ADASGVAAAL ALGAAGVQVG
TAYLLCPEAS ISALHRAALA SPAAAHTALT NLFTGRPARG IVNRLMRECG PISALAPAFP
LATAAIAPLR AAAEARGSAD FTPLWAGQNV SGCQALPAGE LTRRLCPVAD EKA
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