| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3006 |
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| Symbol | |
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| ID | 6163919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3321035 |
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| End bp | 3322459 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665781 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001792031 |
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| Protein GI | 171059682 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAA TCCCCTCGCT CGACGATCTG CGCGCCACCT TCGGCGGCCG GCTGCTCACC
GATCCCACCG AGATGGCGCC GTTCCTGACC GACTGGCGCG GCAAGTGGAC CGGCCGCGCC
CTGGCCGTGG CCCAGCCCGA CCGCGCCACC GACGTGGCCG CGGTGCTGCG CTGGTGCCAT
GAGCATCAGG TTCCGGTCGT TCCCCAAGGC GGCAACACGG GGCTGTCGGG CGGCTCGGTG
CCCGATGACT CCGGCCGCGC GCTGCTGCTG TCGCTGACAC GCCTGAACCG CGTGCGCGAG
GTCGACGTGC TCAACAACAC GCTCACCGTC GAGGCCGGCG TCACGCTGGC GCAGGTGCAG
GCTGCGGCGC TGGCGGCCGA GCGGCTGTTC CCGCTCAGCC TGGCGGCCAA GGGCAGTTGC
ACCATCGGCG GCAACCTGGC CACCAACGCC GGCGGCGTGC AGGTGCTGCG TTACGGCAAC
GCCCGCGAGC TGTGCCTGGG CCTGGAGGTG GTGACCGCCG AGGGCGAACT TTGGGGCGGC
CTGCGCGCGC TGCGCAAGGA CAACACCGGC TACGACCTGC GCGACCTCTA CATCGGCAGC
GAGGGCACGC TGGGTGTCAT CACCGCGGCG GTGCTGAAGC TGTTCCCGCT GCCGGCGGCG
CAGGCGGTGG CGCTGGCGGC GGTGCCGTCG CCGGCCGATG CGGTCAAGCT GCTGCAGCAG
GCGCAGGCCG TGCTCGGCGC GCAGCTCACG GCTTTCGAGC TGATCAGCGA CACCTGCCTC
GGCCTGGTCG AAAAACACGT GCCCGGCAGC CGTCGCCCGC TGGCCGATGC CGCGCCGTGG
TACGTGCTGA TCGAGGCGAG CGACGCCGAG GACCAGTCCC ACGCCGACGC CGCGATCGAG
GCGCTGCTGG AGTCCGCGCT GGAGCAGGGC CTGGCCAGTG ACGCGGCGGT GTCGAGCTCG
CTGGCGCAGT TCGAGGCGCT GTGGGCGCTG CGCGAGAACA TCTCCGAATC GCAGGGCGCC
GAAGGCAAGA CCATCAAGCA CGACATCGCC TTGCCGATCT CGCGCATCGC CGAGTTCATC
GAGGCCACCG ATGCGGCGAT CACGTCGACT TTCCCGAGCG TGCGGCTGGT CGTGTTCGGC
CACCTCGGCG ACGGCAACCT GCACTACAAC CTGTCGCCCG CCGTGGGCCG CACCGGCGCC
GGACACGCCG CCGATTTCCT CGCGCTGGAG GCGCCGCTGA ACCGGCTGGT GCACGACGCG
GTGGCCGCAC GCGGCGGCTC GATTTCGGCC GAACACGGCC TGGGCGTGCT GCGCCGCGAC
GAATCGACGC GCTACAAGTC GGCGGTCGAG CTCGGGCTGA TGCGTGCGCT CAAGGACGCG
CTCGATCCGC TCGGGTTGAT GAACCCGGGC AAATTTCTGG GCTGA
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| Protein sequence | MTAIPSLDDL RATFGGRLLT DPTEMAPFLT DWRGKWTGRA LAVAQPDRAT DVAAVLRWCH
EHQVPVVPQG GNTGLSGGSV PDDSGRALLL SLTRLNRVRE VDVLNNTLTV EAGVTLAQVQ
AAALAAERLF PLSLAAKGSC TIGGNLATNA GGVQVLRYGN ARELCLGLEV VTAEGELWGG
LRALRKDNTG YDLRDLYIGS EGTLGVITAA VLKLFPLPAA QAVALAAVPS PADAVKLLQQ
AQAVLGAQLT AFELISDTCL GLVEKHVPGS RRPLADAAPW YVLIEASDAE DQSHADAAIE
ALLESALEQG LASDAAVSSS LAQFEALWAL RENISESQGA EGKTIKHDIA LPISRIAEFI
EATDAAITST FPSVRLVVFG HLGDGNLHYN LSPAVGRTGA GHAADFLALE APLNRLVHDA
VAARGGSISA EHGLGVLRRD ESTRYKSAVE LGLMRALKDA LDPLGLMNPG KFLG
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