Gene Lcho_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3000 
Symbol 
ID6163913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3307049 
End bp3307522 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID641665776 
Producttransposition helper protein 
Protein accessionYP_001792026 
Protein GI171059677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGAT ACGGACAAGC GTTCAAGGAC AAGGCGGTGG CGAGGTTGTT GCCACCTGAG 
AGTGCATCGC TGGAAGACGT GGCACTGGAG ACAGGAGTTT CGTCGGCCAC GTTGGAGCGC
TGGCGCAGCG AAGCCCTGGG TCAGCCCGAA CGTGAGCGGG TATGGACCGC GGCGGCGAGG
TTTGATGCCG TGCTGACGAC GGCGGCCATG GATGAAGCCT CCAAGAGCGC ATGGTGCCGC
ACGAACGGCG TGTACCCCCA GGAACTTGAT CAGTGGCGGG CGTCGGCCAC ACAGGCGTTG
GCAGCGCCCG AAGAAGCGCG GGCCAGTCCG CAGCAGACCA AACTCGACCG CAAGCGCATC
CAGGAGTTGG AGCGCGAACT GCGGCGCAAG GACCGGGCCT TGGCTGAGAC GGCGGCGCTG
CTGGTACTGT CAAAAAAAGT CGAGGCGATC TTCAACAGGG GCGAGGACGA ATGA
 
Protein sequence
MARYGQAFKD KAVARLLPPE SASLEDVALE TGVSSATLER WRSEALGQPE RERVWTAAAR 
FDAVLTTAAM DEASKSAWCR TNGVYPQELD QWRASATQAL AAPEEARASP QQTKLDRKRI
QELERELRRK DRALAETAAL LVLSKKVEAI FNRGEDE