Gene Lcho_2984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2984 
Symbol 
ID6161443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3287435 
End bp3289063 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content72% 
IMG OID641665761 
Producthypothetical protein 
Protein accessionYP_001792011 
Protein GI171059662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC CGACCGACTT CAACGACCTG GCGGCGGCGG CCGGCCTTGA CGCGGTGCGC 
GCACAGGTGG CCGACGCACT GCGCCTGTCT GAGCCCGCGC AGCTGTCCAC CGATGCCCAG
GCATGGGGAT CGGGTGTCGC GGCGCTTGGT GATCCTGCTG CTGACGCTGA GGGCCTGCCC
TGGCCGGCGC CGGTGCTGCC GGGCACACGC CCGACTCCCG AGATCCCGGC GCGGCTGCTG
CCGACCTGGC TGGGCGACAT GGCCGCGGCG GTGGCGGCGA GCACGCAGAC CCCGCCGGCG
CTGGCGGTGC TGACGGGCCT GTCGGTGCTG GCCACGGCGC TGCAGCGGCG CTTCGAGGTC
TCGCCCTACG GCGACGACTA CCGCGAGCCC CTGGCTCTGT TCGTGGCCGT GCTGCTGGGC
AGCGGCAACC GCAAGAGCGC GGTCTTCACC GCGATGACGG CGCCGATCGT GCTGAGCGAG
AAGCGGGCGC GGGATCGAGC GCGGGCACGG ATCGCGCGCA ACGAGTCGGA GCGGGCGGTG
GCGCGCAAGC GCATCGAGCG CCTACTCGCC GAGTCGGCCA AGGCGAAGGA CGAAGGCGAG
CGCGAGAACG TGCGCGCGGC GATCCAGGCC GAAGAGGAGG CCATGCCCGA GGAGCTGCAC
ACGCCGCGGC TGTTCACCAC CAACGCCACC GCCGAGGTGC TGCAAGCCCT GCTGGTCGAA
CAGAAGGGCC GCATGGCCAT CCTGGCCGAC GAAGGCGACG TGCTGGCCGT GCTGGGCGGG
CTCTACTCGG GCGGCAAGGC GGCGCTCGAC GTGCTGCTGA TGGGGCACGC AGGAACGCCG
ATCCGGGTGG ACCGGGCGGG CCGTACCGCG CACATCGACC GGCCAGCGCT CACGATCGGC
CTGGCCATCC AGCCCGGCAC CATGGCGGAG CTGGCCGGAT CGAAGCGCTT CCGGGATTCG
GGCCTGCTGG CGCGCTTCCT GGTGGCCATG CCGGCGAGCA ACCTCGGACG GCGTGACGTG
CGCCAGCGGC TGCCGATCCC GGCCGAGGTG CGCCAGGCCT ATCAAGAGCG CCTTCTCGCG
CTGCTGGAAG CCGGGGAAGA GCCGCCCGAG GAGCCGGCGG TGCTGGTGTT CTCCGACTCG
GCGCGCGAGC TGTGGCTCGA CCTGGCCGAG TACGTCGAGC TCGGGCTCGC ACCGGGCGGC
GCCTTCGATG CGATCGGCGA CTGGGCCGGC AAGCTGCCGG GCGCAGTGGC ACGCATCGCG
GCGCTGCTGG AACTGGCCGA GACGGGCCTG CATGCCGACA TGGTGCACGA GGACACCATG
CGCCGAGCCA TCGAGCTTGG CGAGCTGCTG ACCGTGCACG CGCAGGCCAT GTTCGGCCTG
TTGGGTGCCG ATGCGGTCGA CGTCGACGCG CAGGCGGTGC TGGCCTGGTG CCGGGCTCAG
CAGCACCACG AGTTCACGGC GCAAGAGTGC CGGCTGGCCA TGCGCGGGCG GTTCTCGACC
ACGGCGCGCC TCGATGCAGC GATGCACCGG CTGATGTCTG ACCACGTGCT GCGCGAGGTG
AGCCGGGCCA ATCCGGGCGC GCGGCCTTCG CGTCTGTTCC TGGTCAATCC TGGCCTGTTT
GTGCAGTAA
 
Protein sequence
MNKPTDFNDL AAAAGLDAVR AQVADALRLS EPAQLSTDAQ AWGSGVAALG DPAADAEGLP 
WPAPVLPGTR PTPEIPARLL PTWLGDMAAA VAASTQTPPA LAVLTGLSVL ATALQRRFEV
SPYGDDYREP LALFVAVLLG SGNRKSAVFT AMTAPIVLSE KRARDRARAR IARNESERAV
ARKRIERLLA ESAKAKDEGE RENVRAAIQA EEEAMPEELH TPRLFTTNAT AEVLQALLVE
QKGRMAILAD EGDVLAVLGG LYSGGKAALD VLLMGHAGTP IRVDRAGRTA HIDRPALTIG
LAIQPGTMAE LAGSKRFRDS GLLARFLVAM PASNLGRRDV RQRLPIPAEV RQAYQERLLA
LLEAGEEPPE EPAVLVFSDS ARELWLDLAE YVELGLAPGG AFDAIGDWAG KLPGAVARIA
ALLELAETGL HADMVHEDTM RRAIELGELL TVHAQAMFGL LGADAVDVDA QAVLAWCRAQ
QHHEFTAQEC RLAMRGRFST TARLDAAMHR LMSDHVLREV SRANPGARPS RLFLVNPGLF
VQ