Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2983 |
Symbol | |
ID | 6161442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3286623 |
End bp | 3287438 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641665760 |
Product | hypothetical protein |
Protein accession | YP_001792010 |
Protein GI | 171059661 |
COG category | [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CCGACCACTT CGAGGCCTTC ATGCGCTCGG TCGGCCTGGC GCCGGCCAAG CCGCTGAATC TGACAGACGG CAAGCTCGAA CGCTTCCGCG TGGAGGGCGA CAAATCCGGC TCCCGCAACG GCTGGGCCGT GATGTACAGC CACCCCGACG TGTGGGGCGT GGTCGGTTCC TGGCGCACCG GTGAACAGCA CAGCTGGCGC GAGCTGGTGC GCCAGCACAT GACCGCGCAG GAACGCCGCC AGCTGCAGCT GCAGCGCGAG CAGGCGACCG CGGCGCGGCT GGCCGATCAG CAGCGGGCCC ACGCCGAAGC GCAGGCCAAG GCGCTGAAGC TGTGGCGTCT GGCCAGGCCG GCGATCGACG CGCATCCCTA CCTGCAGCGC AAACGCGTAC ACGCCTATGG CTTGCGCCAG CTGGGCGAGC GCCTGCTGGT GCCGGCGCGT GACCGCCAGG GCGAGCTGCA CACGCTGCAG TTCATCGACG CCGACGGCAC CAAGCGCTTC CTGACCGGCG GGCGCATCGG CGGCTGTTAC TGCGCCATCG GCGAGCCCCG TGACGGGCTG CTGGTGTGCG AGGGCTACGC GACGGCGGCG ACGCTGTTCG ATGCCACCGG CATAGCCACG GCTGCGGCTT TTTCGGCCGG CAACCTGGCG CGGGTGGCGG TGGCGCTGCG ATCGAAGTTC CCGCAGGCCC GCATCGGGAT CTGTGGCGAC CGCGACGACA GCGGCACCGG CCAGGCCGCA GCGATCGAGG CGGCGCGTGC GGTCGGTGGC CTGGTGGCGC TGCCGACCTT CGGAGGTAGC CAATGA
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Protein sequence | MSAADHFEAF MRSVGLAPAK PLNLTDGKLE RFRVEGDKSG SRNGWAVMYS HPDVWGVVGS WRTGEQHSWR ELVRQHMTAQ ERRQLQLQRE QATAARLADQ QRAHAEAQAK ALKLWRLARP AIDAHPYLQR KRVHAYGLRQ LGERLLVPAR DRQGELHTLQ FIDADGTKRF LTGGRIGGCY CAIGEPRDGL LVCEGYATAA TLFDATGIAT AAAFSAGNLA RVAVALRSKF PQARIGICGD RDDSGTGQAA AIEAARAVGG LVALPTFGGS Q
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