| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2976 |
|---|
| Symbol | |
|---|
| ID | 6160601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3281841 |
|---|
| End bp | 3282752 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641665752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001792003 |
|---|
| Protein GI | 171059654 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCA TGTCGCAGGT TCCGGCGCAT CCGGGCGTTG CAGAAGAAGG GACTGCTCCG
GACGACGAGC GAACGCGCTG GCTCGAGGTG CAGTACAACA ATCGGGCCCG CATTCCCGAG
CACCCGCAGA TCTTTGCGCG CTGGGCTGCG GTCTCGGCAC AGGTGAGGGC GCAGTCGCAC
TGTGAGCTCG ACCTGCCGTA CGGCCCGACC GCGGGGCAGC GGCTGGATGT CTTTCCGTGT
GACGACGATG GTGCGCCGGT GCTGGTCTAT CTGCACGGCG GCTGGTGGCG CTCGCTCGAC
AAGTCCGATC AGTCGCTGGT GGCGCCGGCT TTCGTGCGCG GCGGTGCGAT GGTGGTGGTG
CCCAACTACG ACCTTTGCCC TGCCGTCGGC ATCGACACCA TCGTGCAGCA GGTGGCGCAG
TCGGTGGCCT GGGTGTGGCG CAATGCGGCG CGTTTCGGGG CCGACAGGCG CCGCATCGTG
CTGGCCGGGC ACTCGGCCGG CGCGCAGTTG GCGGCGATGT TGCTGGGTCT TGACTGGCCG
AAGCTGGCGC CCGATCTGCC GGCCGCCATG CTGCGCAGCG GTCTGGGGCT GTCGGGTGTC
TACGATCTCG GGCCGCTGAT GGCGACGCCG TTCCTGCAGC AGGATCTGCG GCTCGATGAA
GGCCAGGTGG CGCGATTGAG TCCGGCGCGC CTGACCGCGC CCAAGGGCCG TTTCGCCGCT
TTGGTGGGGG GCTTGGAGAG CGAGGAGTTC CTGCGTCAGA ACCAGCTCAT CGCATCGGCC
TGGGGCCGGC GCGTGGTACC GGTCTGCGAG GCCCTGCCGG GCGTTCATCA CCTGTCGATC
GTCGACGAAC TGGCCGAGCC GGGGACGCGG GTGCAGTCGC TCGCCTGGGA ATTGCTGGAT
CAGGGCGCCT GA
|
|---|
| Protein sequence | MTVMSQVPAH PGVAEEGTAP DDERTRWLEV QYNNRARIPE HPQIFARWAA VSAQVRAQSH
CELDLPYGPT AGQRLDVFPC DDDGAPVLVY LHGGWWRSLD KSDQSLVAPA FVRGGAMVVV
PNYDLCPAVG IDTIVQQVAQ SVAWVWRNAA RFGADRRRIV LAGHSAGAQL AAMLLGLDWP
KLAPDLPAAM LRSGLGLSGV YDLGPLMATP FLQQDLRLDE GQVARLSPAR LTAPKGRFAA
LVGGLESEEF LRQNQLIASA WGRRVVPVCE ALPGVHHLSI VDELAEPGTR VQSLAWELLD
QGA
|
|---|
| |