Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2975 |
Symbol | |
ID | 6160600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3281143 |
End bp | 3281817 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641665751 |
Product | electron transport complex, RnfABCDGE type, B subunit |
Protein accession | YP_001792002 |
Protein GI | 171059653 |
COG category | [C] Energy production and conversion |
COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCC CGCTCCGCCC CGTCGATGTC GACCCGATCG ACGCCCTGCT GCCGCAGACC CAGTGCACGC GCTGCGGCTA CCCCGACTGC CGCGCCTACG CGCAGGCGAT CGCCGAGGGC GCGGCGCCGA TCAACCGTTG CCCGCCCGGC GGCGCCGAGG GCATTCGGCG CCTGGCTGCA CTGACCGGCC AGCCCGAGTC GCCGCTCGAC CCCGAGTGCG GCACGGAAGG CCCGCGCACC GTGGTCTGGA TCGACGAAGC CTGGTGCATC GGCTGCACCC TGTGCATCAA GGCCTGTCCG GTCGACTGCA TCGTCGGCGG ACACAAGCGG ATGCACAGCG TGATCGAAGC CGATTGCACC GGCTGCGAAC TGTGCCTGCC GGCGTGCCCG GTCGACTGCA TCCAGGTCGA GGTGGTCACG CCGGGGGCCT CGGGCTGGAA CGCCTGGAGC CCGGCCCAGG CCGGCCGATC GCGCAGCGCC TACGAGCAGC GCACCCGACG CCTGGAAGCC GCCGAGCGCG CACATGCCGA CGCCCTGCTG GCCAAGACCG AAGACAAGCT CGCGCATCTC GAAGAACTCA CGCGCCACAA CACGCCGGCC GAGCTGCAAC GCAAGCGCAG CGTCGTCGAA GCGGCCCTGG CACGCGCCCG CGCGCAGCGC AAGCCGCAGC CCTGA
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Protein sequence | MIAPLRPVDV DPIDALLPQT QCTRCGYPDC RAYAQAIAEG AAPINRCPPG GAEGIRRLAA LTGQPESPLD PECGTEGPRT VVWIDEAWCI GCTLCIKACP VDCIVGGHKR MHSVIEADCT GCELCLPACP VDCIQVEVVT PGASGWNAWS PAQAGRSRSA YEQRTRRLEA AERAHADALL AKTEDKLAHL EELTRHNTPA ELQRKRSVVE AALARARAQR KPQP
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