| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2973 |
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| Symbol | hppA |
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| ID | 6160454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3277387 |
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| End bp | 3279525 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665749 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_001792000 |
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| Protein GI | 171059651 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAT CCACAGCGCT GATGCTGGCG CTGCTCTGCG GCGTAGCCGC CGTCATCTAC
GGCTTCGTCT CGCGAAGCTG GATCCTCGGT CAGGACGCGG GCAACGCCCG CATGCAGGAG
ATCTCGGCGG CGATCCAGCA AGGTGCGGCC GCCTACCTGG CGCGCCAGTA CAAGACCATC
GCGATCGTCG GCGTGGTGCT GGCGGTGCTG ATCTTCGCGT TCCTGGACGG CAAGTCGGCG
GCGGGCTTCG TGCTCGGCGC GGTGCTGTCG GGCGCCTGCG GATTCATCGG CATGAACGTC
TCGGTCAAGG CCAACGTGCG CACCGCGCAG GCCGCCACCC AGGGGATCGG CCCGGCGCTC
GACGTCGCCT TCCGCGGCGG CGCCATCACC GGCATGCTGG TGGTCGGCCT CGGGCTGCTG
GGCGTGGGCC TGTTCTTCTG GTACCTGACC GGCGGCACCG ATGCGACGCC GGACACCCTC
AAGCCGCTGC TCGGATTCGC CTTCGGTGCC TCGCTGATCT CGATCTTCGC GCGGCTGGGC
GGTGGCATCT TCACCAAAGG CGCGGACGTC GGCGCCGATC TGGTGGGCAA GGTCGAGGCC
GGCATCCCCG AGGACGACCC GCGCAACCCG GCGGTGATCG CCGACAACGT CGGCGACAAC
GTCGGCGACT GCGCCGGCAT GGCCGCCGAC CTGTTCGAGA CCTACGCCGT CACGCTGATC
GCCACCATGG CGCTGGGTGC GCTGATGGTC ACCGGCGCCA CGCTGCAGGC GGTGATCTAC
CCGCTGGTGC TGGGCGGCGT GTCGATCATC GCGTCGATCA TCGGCTGCTA CTTCGTCAAG
GCCAGCCCGG GCATGAAGAA CGTGATGCCG GCCCTCTACA AGGGCCTGGC GGTGGCGGGT
CTGCTGTCGC TGATCGCCTT CTGGTTCGTC ACCTCGATGG TGATGCCGGC CGACGCGCTG
GGCGCGGGCA CGCACGGCAA GCTGTTCGGC GCCTGCGCCG TCGGCCTGGT GCTGACCGCC
GCGCTGGTGT GGATCACCGA GTACTACACC GGCACGCAGT ACGCGCCGGT CAAGCACATC
GCGCAGGCCT CGACCACCGG CCACGGCACC AACATCATCG CCGGCCTGGG GGTGTCGATG
CGCTCGACCG CCTGGCCGGT GCTGATGGTG TGCGTGGCGA TCCTGGTCTC CTACGGCCTG
GCCGGCCTGT ACGGCATCGC GGTCGCCGCC ACCTCGATGC TGAGCATGGC CGGCATCGTG
GTCGCGCTCG ACGCCTACGG TCCGATCACC GACAACGCCG GTGGCATCGC CGAGATGGCC
GAGCTGCCCA AGAGCGTGCG CGACGTCACC GACCCGCTCG ACGCCGTCGG CAACACCACC
AAGGCCGTCA CCAAGGGCTA CGCCATCGGC TCGGCCGGCT TGGCCGCGCT GGTGCTGTTC
GCCGACTACA CCCACTCGCT CGACGCGCGT GGCATGGACG TGTCGTTCGA CCTGAGCGAC
CCGAAGGTGA TCGTCGGCCT GTTCATCGGC GGGCTGATCC CCTACCTGTT CGGCGCGATG
GCGATGGAGG CGGTGGGCCG CGCCGCCGGT GCGGTGGTGG TGGAAGTGCG CCGCCAGTTC
CAGGACGGCC TGATCATGGC CGGCAAGCGC AAGCCCGACT ACAGCGCGGC GGTCGACATG
CTCACCAGCG CAGCCATCAA GGAGATGGTG GTGCCCTCGC TGCTGCCGGT GGTGGTGCCG
ATCGTGGTCG GCCTGACGCT GGGTGCTGCG GCGCTGGGCG GCCTGCTGAT GGGCACCATC
GTGACCGGCC TGTTCGTGGC GATCTCGATG TGCACCGGCG GCGGCGCCTG GGACAACGCC
AAGAAATACA TCGAGGACGG CCACTTCGGC GGCAAGGGCA GCGACACCCA CAAGGCCGCC
GTCACCGGCG ACACCGTGGG CGATCCGTAC AAGGACACCG CCGGCCCGGC CGTCAACCCG
CTGATCAAGA TCATCAACAT CGTGGCGCTG CTGATCGTGC CGCTGCTGCC GATGACCGGC
AGCAGCCAGC CGGCCAGCGC CGCCCATGCA CCGGCCGCAC AGGTCGCCGC CAGCGCCGTT
CAGCAGGCCG CGCCGGTCGC GCCGACCGCA AGTCAGTAA
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| Protein sequence | MSTSTALMLA LLCGVAAVIY GFVSRSWILG QDAGNARMQE ISAAIQQGAA AYLARQYKTI
AIVGVVLAVL IFAFLDGKSA AGFVLGAVLS GACGFIGMNV SVKANVRTAQ AATQGIGPAL
DVAFRGGAIT GMLVVGLGLL GVGLFFWYLT GGTDATPDTL KPLLGFAFGA SLISIFARLG
GGIFTKGADV GADLVGKVEA GIPEDDPRNP AVIADNVGDN VGDCAGMAAD LFETYAVTLI
ATMALGALMV TGATLQAVIY PLVLGGVSII ASIIGCYFVK ASPGMKNVMP ALYKGLAVAG
LLSLIAFWFV TSMVMPADAL GAGTHGKLFG ACAVGLVLTA ALVWITEYYT GTQYAPVKHI
AQASTTGHGT NIIAGLGVSM RSTAWPVLMV CVAILVSYGL AGLYGIAVAA TSMLSMAGIV
VALDAYGPIT DNAGGIAEMA ELPKSVRDVT DPLDAVGNTT KAVTKGYAIG SAGLAALVLF
ADYTHSLDAR GMDVSFDLSD PKVIVGLFIG GLIPYLFGAM AMEAVGRAAG AVVVEVRRQF
QDGLIMAGKR KPDYSAAVDM LTSAAIKEMV VPSLLPVVVP IVVGLTLGAA ALGGLLMGTI
VTGLFVAISM CTGGGAWDNA KKYIEDGHFG GKGSDTHKAA VTGDTVGDPY KDTAGPAVNP
LIKIINIVAL LIVPLLPMTG SSQPASAAHA PAAQVAASAV QQAAPVAPTA SQ
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