Gene Lcho_2958 details

Gene Information

• Locus tag: Lcho_2958
• ID: 6160397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 3257925
• End bp: 3258560
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641665736
• Product: glutathione S-transferase domain-containing protein
• Protein accession: YP_001791987
• Protein GI: 171059638
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 58
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGAAC TGGTCCTGTA CACGAACCCG CAGTCACGCG GTCGCATCGC CCACTGGATG 
ATCGAGGAAA CCGGCCTGCC CTACCGCACC GAATGGGTCG CTTACGGCCC GCCGATGAAG 
GGCCAGCCCT ACCGCTCGAT CAACCCGATG GGCAAGGTGC CGGCGCTGCA GGACGGCAGC 
GCGGTGGTGA CCGAAGCCGC CGCGATCTGT GCCTGGTTGG CCGAACGCAA CCCCGAAGCC 
GCACTCGCCC CGCCGATCGG CAGCCCGGTG CGCGCCGCCT ATTACCGCTG GCTGTTCTTC 
GCCGCCGGCC CGCTGGAGCA GGCCACCACC GCCCGCGCGA TGGGCTGGCA GGTGCCCGAA 
GGCCGCAACG GCATGGTCGG TTTCGGCTGC TACGAGGACA CCCTGAACGC GCTGGAATCG 
GCGCTGCAGC CTGGCCCCTG GATCTGCGGC GAACCGTTCA CCGCCGCCGA CGTCTACATC 
GGCTCGGCGC TCGGTTGGGG AATGATGTTC GGCACCATCG ACAAGCGGCC GGCGTTCGAG 
GCCTATGTGA CGCGGGCGCG GGCTCGGCCG GCCTGGTTGC GGGCGGAGGC GTTGAATGCG 
GCGCGGTTGA AGGAAACAGA GGCCGCCAAG CACTGA 

 

Protein sequence

MSELVLYTNP QSRGRIAHWM IEETGLPYRT EWVAYGPPMK GQPYRSINPM GKVPALQDGS 
AVVTEAAAIC AWLAERNPEA ALAPPIGSPV RAAYYRWLFF AAGPLEQATT ARAMGWQVPE 
GRNGMVGFGC YEDTLNALES ALQPGPWICG EPFTAADVYI GSALGWGMMF GTIDKRPAFE 
AYVTRARARP AWLRAEALNA ARLKETEAAK H