Gene Lcho_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2956 
Symbol 
ID6160395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3256555 
End bp3257034 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID641665734 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001791985 
Protein GI171059636 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA AGAACACCAT CTGCCTCTGG TTCGACGGCA CCGCGCTCGA AGCCGCGCAG 
TTCTACGCCG CCACCTTTCC GGACAGCGCC GTCGGCGCCG TGTTCCACGC GCCTGCCGAC 
TACCCGATGG GCAAGCAGGG CGACGTGCTG ACGGTCGAAT TCACCGTCGC CGGCATCCCC 
TGCATCGGCC TGAACGGCGG GCCGATCTTT CCGCACACCG AGGCGTTCTC CTTCCAGATC 
GCCACCGACG ACCAGGCCGA GACCGACCGC CTGTGGCACG CCCTCATCGA CCACGGCGGC 
CAAGCCAGCG CCTGCGGCTG GTGCAAGGAC AAGTGGGGCC TGAACTGGCA GATCACGCCG 
CGCGCGCTGA TCGATGCGCT GGCCAGCCCG GACCGCGAGG CGGCGCGGCG GGTGTTCGAG 
GCGATGATGG GGATGACGAA GATTGAGATT GCGGGGGTGG AGGAGGCGAG GCGGGGGTGA
 
Protein sequence
MTAKNTICLW FDGTALEAAQ FYAATFPDSA VGAVFHAPAD YPMGKQGDVL TVEFTVAGIP 
CIGLNGGPIF PHTEAFSFQI ATDDQAETDR LWHALIDHGG QASACGWCKD KWGLNWQITP 
RALIDALASP DREAARRVFE AMMGMTKIEI AGVEEARRG