| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2949 |
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| Symbol | |
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| ID | 6159715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3251121 |
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| End bp | 3252008 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665728 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001791979 |
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| Protein GI | 171059630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG GTGCGCTCTA CGCGGCAGCG GCGTACACGC TGTGGGGGCT GTTCCCGCTC
TATTTCGCGC TCGTCAGCGA GATCCCGGCG CTCGAGATCA CCGCGCACCG CGTGGTCTGG
TCGCTGCTGT TCATGCTGGT GCTGATGGGC GCGCTGCGCC GCCACGCCTG GCTCGGCCCG
GCGCTGCGCG ACCGGCGCGT GCTGCTGGCC TTCCTGGGCA GCTCGGCGCT GCTGGCGCTC
AACTGGTTCA TCTACGTCTG GGCCGTCACG CACGGGCGGG TGGTCGAGGC GAGCCTGGGC
TACTTCATCA ACCCGCTGTT CAACGTGCTG CTCGGCCGGC TGGTGATGCA CGAGCAGCTG
CGCCCGGCGC AATGGGCCGC CGTGGCGCTG GCGGCGCTGG GCGTGGCCTG GCTGACCTGG
CACCAGGGCG CGCTGCCGTG GATCGCGCTC GGCCTGGCGG CCAGCTTCGG CACCTACGGC
CTGCTGCGCA AGGTGGCGAC GCTGGGCGCG CTGGAGGGCC TGACGCTCGA AAGCCTGGTG
CTCGCGCCCT TTGCCGCCGC CGGCCTGATC TGGGCGGGCT GGCACGGCCA GACCGGCTTC
CAGCACGCCG ACATCGGCCT GCAGGCGCTG CTGGTCTCGG CCGGCCCGCT CACCGCCATC
CCGCTGCTGT TCTTCGGCGC CGCGGCGCAG CGCATCCCGC TCAGCCTGCT GGGCATGCTG
CAATACATCG GGCCGACCCT GCAGCTGCTG ATCGGCGTGT GGTTCTTCAA CGAACCGTTC
GCCGGCGCCC GCGCCCAGGG TTTCATGCTG ATCTGGTGCG CCTGCGCGGT CTTCAGCCTC
GAATTCTGGC TGCGCACGCG CGCCACCCCG GCGCCCCTGC CGACCTGA
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| Protein sequence | MRRGALYAAA AYTLWGLFPL YFALVSEIPA LEITAHRVVW SLLFMLVLMG ALRRHAWLGP
ALRDRRVLLA FLGSSALLAL NWFIYVWAVT HGRVVEASLG YFINPLFNVL LGRLVMHEQL
RPAQWAAVAL AALGVAWLTW HQGALPWIAL GLAASFGTYG LLRKVATLGA LEGLTLESLV
LAPFAAAGLI WAGWHGQTGF QHADIGLQAL LVSAGPLTAI PLLFFGAAAQ RIPLSLLGML
QYIGPTLQLL IGVWFFNEPF AGARAQGFML IWCACAVFSL EFWLRTRATP APLPT
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