Gene Lcho_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2946 
Symbol 
ID6159712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3249435 
End bp3249737 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content70% 
IMG OID641665725 
Producthypothetical protein 
Protein accessionYP_001791976 
Protein GI171059627 
COG category[R] General function prediction only 
COG ID[COG2388] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATT TCACTCCCTT CACCGCCACG CACGACCGCG AGCACCAGCG TTTCGAGGTG 
GTCATCGACG GCCATGCCTG CGTCGCCGAC TACCGGCGCA AGGACGGCGT CGTCACCTTC
ACCCACACCG GCGTGCCGCG TGAGCTGCAA GGCCGCGGCA TCGCCGCCGA GCTGGTCCGC
CAGGTGCTTG CATGGGCCGA GGCCGAAGGC CTGAGGGTGA TCCCGGCCTG CTCCTACGTG
CAGGTCTACA TGCGCCGCCA TCCGCAGACA CTCGGCCTGC TGGCGCAGCG CGGCGCGGTC
TAG
 
Protein sequence
MPDFTPFTAT HDREHQRFEV VIDGHACVAD YRRKDGVVTF THTGVPRELQ GRGIAAELVR 
QVLAWAEAEG LRVIPACSYV QVYMRRHPQT LGLLAQRGAV