| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2943 |
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| Symbol | |
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| ID | 6159736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3244322 |
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| End bp | 3245338 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665722 |
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| Product | protein TolA |
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| Protein accession | YP_001791973 |
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| Protein GI | 171059624 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5178] U5 snRNP spliceosome subunit |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA GGATGGCAAG CCCCGAGCTG GCGCTGGACG CGATGCGCCG CCCGCCGTCG
CCCGACGGCA TGGGCGCGGG CACGACGCTG GCCGTGCTGG TGCACGTCGG CCTGGTCGCC
GCGCTGGCCT ACGGCGTGGC TTGGCGGCGC CACGAGGTCA ACACCGTCTC GGCCGAACTC
TGGGCCGCCG TGCCGCAGAT CGCCGCGCCG ATGGCCGCCG AGCCCCCGCC GCCGGCCGTG
CCCACGCCGG CACCGAAGCC GGCCCCTACC CCGCCGCCGC CTCCTGCGCC AGCCCCGCAG
CCGCCACCCA AGGCCGAACC GAAACCCAGC CGCGACGCCG ACATCGCGCT CGAGAAGGCA
CGCAAGAAGG CCGAGGCCGA GCGCGAAGAA GCCGAGCGCC TGGCCGAGAA GAAAAAGGCC
GACGAGAAGA AGGCCCGGGA CAAGCGCCTG GCCGACGAGA AGGCCGAAAA GCTCGCCAAG
GCCGAGAAGG AAAAGGCCGA GAAGGCTGAA AAGGCGGAGA AAGCCGAAAA GGCCGAAGCC
AAGCGCCTGG CTGACAAGAA GGAGGCCGAG GCAAAGGATC GCGCCGAAGC CGCCAAGGAC
GCCCGCGCCG CCAAGGCGCA GGCCGACGCC CTGGCCAAGC AGCGCGCCGA CAACCTGCGG
CGCCTGAACC AGCAGCTGGG CAACAACCCG GCCGTCGGCA ACGCGACCAC GCCCAGCGCC
GGCACCGCGG CGCAGTCGGC CGCGCCGTCG GCCGGCTACG AGGGCCGCAT CCGCGCGCGC
ATCCTGCCCA ACATCGTCTT CACCGGCCGC ATCAGCGGGC CGACGGTGGC CGAGGTCGAG
GTGCGGGTGG CGCCCGACGG CACCATCCTC GGCAGCCGCC TGCTCAAGTC GAGCGGTCTG
GCCGAATGGG ACCAGGCGGT GCTGCGCGCC ATCGAGCGCA CCGAGATCCT GCCGCGCGAC
ATCGACGGCC GGGTGCCGCC GCTGATGGTG CTGAGCTTCG ACCCGAACCG GCGCTGA
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| Protein sequence | MATRMASPEL ALDAMRRPPS PDGMGAGTTL AVLVHVGLVA ALAYGVAWRR HEVNTVSAEL
WAAVPQIAAP MAAEPPPPAV PTPAPKPAPT PPPPPAPAPQ PPPKAEPKPS RDADIALEKA
RKKAEAEREE AERLAEKKKA DEKKARDKRL ADEKAEKLAK AEKEKAEKAE KAEKAEKAEA
KRLADKKEAE AKDRAEAAKD ARAAKAQADA LAKQRADNLR RLNQQLGNNP AVGNATTPSA
GTAAQSAAPS AGYEGRIRAR ILPNIVFTGR ISGPTVAEVE VRVAPDGTIL GSRLLKSSGL
AEWDQAVLRA IERTEILPRD IDGRVPPLMV LSFDPNRR
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