Gene Lcho_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2940 
Symbol 
ID6159733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3242690 
End bp3243127 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID641665719 
Producttol-pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001791970 
Protein GI171059621 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAC CGATCCGGCC CGCAGACCGC GCGGCGACTG CCCCCTTCAC CTGGCCCCTG 
CGCGTCTACT GGGAAGACAC CGACGCCGGC GGCGTGGTCT TCTACGCCAA CTACCTGAAG 
TTCTTCGAGC GCGCGCGCAC CGAATGGCTG CGCAGCCTGG GCTTCTCGCA GGAGCAGTTG 
CGCCTCGATA CCGGCGTGAT GTTCGTCGTC ACCGATACTT CGGTGCGCTA CCGCCAACCC 
GCCCGGCTCG ACGAAGAACT GCACGTCAGC GTGCGGGTGG TCGAACAAGG CCGCGCCAGC 
CTGGTGATCG ACCAGCAGGT GCAGCGCGCC GACACGCTGC TGGTCGAAGG CCGCATCCGC 
ATCGGCTGCG TCGACAGCCG CACTTTCGTG CCGCGACGCA TCCCCCCTTT CATCCTTGAA 
CGAATGACTG CTGCATGA
 
Protein sequence
MNAPIRPADR AATAPFTWPL RVYWEDTDAG GVVFYANYLK FFERARTEWL RSLGFSQEQL 
RLDTGVMFVV TDTSVRYRQP ARLDEELHVS VRVVEQGRAS LVIDQQVQRA DTLLVEGRIR 
IGCVDSRTFV PRRIPPFILE RMTAA