| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2938 |
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| Symbol | |
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| ID | 6159731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3240146 |
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| End bp | 3241336 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665717 |
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| Product | aminotransferase |
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| Protein accession | YP_001791968 |
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| Protein GI | 171059619 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCCTGG CCCGCCGGGT CGACCAGATC GAGCCGTTCT GGGTGATGGA GTGCGCCAAG
GCGGCCGACG AGATCGCCCG CAGCCCGGCC TGCGACCCGG CACTCGGCGG CGAGTCGATG
ATCTACCTGA ACATCGGCGA GCCCGACTTC ACCGCGCCGC CGCGGGTGCT CGAAGCCGCG
CAGCGGTGCC TGGCCGAGGG CCGCACCCAG TACACGAGCG CCACCGGCCT GCCGGCGCTG
CGCGAGGCGA TCGCGCGCTG GTACGCCAGC CGCTGGGGTC TGGACATCGA CCCGGCGCGC
ATCGTGATCA CCGCCGGCGC CTCGGCCGCG CTGCAGCTGC TGTGCACCGC GCTGGTCGAG
CCGGGCGACG AGATCCTGAT GCCCGACCCG AGCTACCCCT GCAACCGCCA TTTCGTGACG
GCCGCAGGCG GCGTGCCCCG GCTGCTGCCG GCCGGCCCGG CGCAGCGTTT CCAGCTCGAC
GCCGCCTCGG TGGCCGAGGC CTGGGGCCCG GCCACGCGCG GCGTGATGCT GGCCTCGCCG
TCCAACCCGA CCGGCACCTC GATCGACGCC GACGAGCTGC AGCGCATCGT CGAAGTCGTG
CGCGCGCGCG GCGGCATCAC GATCGTCGAC GAGATCTACC TCGCGCTCGG CTACGACAGC
GCACACGACC GCAGCGCGCT GGCGCTGGGC GACGACGTGC TGGTGATCAA CAGCTTCAGC
AAGTACTTCG GCATGACCGG CTGGCGGCTC GGCTGGCTGG TGCTGCCGCC GGCGCTGGTC
GGCGCGGTCG AGAAGCTGGC GCAGAACTTC TACATCTGCG CCTCGGCCGT GGCCCAGCAC
GCCGCGCTGG CGTGTTTCCA CCCCGACACG CTGGCCGAGT GCGAGCGCCG CCGCGAGGTC
ATGCGCCAGC GCCGCGACGC CATCGTGCCG CAGCTCGAAG CGCTCGGCCT GGCCGTGCCG
GTGCGCCCGG ACGGCGCCTT CTACGTCTGG ATGGACACCC GCCGCCATGC GAGCAACAGC
TGGGATTTCT GCTTCGACAT GATGCGCAGC GCACACGTGG CCCTCACCCC CGGACGCGAT
TTCGGCCATG CCGAGACCGC CCACTACGCC CGACTGTCGT TCGCCAGCTC GCTGCCGCAG
CTGGAAGCGG CGGTGGCTCG CCTGCAGCGC GTCCTGCGCC CACAGTCATG A
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| Protein sequence | MRLARRVDQI EPFWVMECAK AADEIARSPA CDPALGGESM IYLNIGEPDF TAPPRVLEAA
QRCLAEGRTQ YTSATGLPAL REAIARWYAS RWGLDIDPAR IVITAGASAA LQLLCTALVE
PGDEILMPDP SYPCNRHFVT AAGGVPRLLP AGPAQRFQLD AASVAEAWGP ATRGVMLASP
SNPTGTSIDA DELQRIVEVV RARGGITIVD EIYLALGYDS AHDRSALALG DDVLVINSFS
KYFGMTGWRL GWLVLPPALV GAVEKLAQNF YICASAVAQH AALACFHPDT LAECERRREV
MRQRRDAIVP QLEALGLAVP VRPDGAFYVW MDTRRHASNS WDFCFDMMRS AHVALTPGRD
FGHAETAHYA RLSFASSLPQ LEAAVARLQR VLRPQS
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