Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2937 |
Symbol | |
ID | 6160115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3239528 |
End bp | 3240043 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641665716 |
Product | NusB antitermination factor |
Protein accession | YP_001791967 |
Protein GI | 171059618 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGCTC CCCTGTCCAA GCCGGCGCCC GGCGGCAAGC CGCGCGGCAA CGCCACGCCC GCCGGCGCGC CGCGCCCGAA GTCGGCCCGC CGACGTTCGC GTGAGCTGGC GCTGCAAGGC CTCTACGAAT GGCAGGTCGG CCAGGCCGAC TCGCACGTCG TCGAGGCCCA CATGCGCGAG CAGGAAGACC ACGCCAAGTG CGACACGGCG CATTTCTCGG CGCTGCTGCA CGGCTGCATC GCCCAGGTGG CGGCGCTCGA CGCGGTGCTG ACGCCGCACC TCGACCGCCG CGTGCAGGAG CTGTCGCCGG TCGAACACGG CGTGCTGCTG ATCGGCGCCT ACGAGCTGCA GCACTGCCTC GACGTGCCGT ACAAGGTGGC GATCAACGAG GCGGTCGAAC TGGCCAAGTC GTTCGGCGGC ACCGACGGGC ACAAGTACGT CAACGGCGTG CTCGACAAGG CCGCCGCCGA CCTGCGCCCC GCCGAAGTGG CCGCCCAGCG CAACCGCCGC ACCTGA
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Protein sequence | MNAPLSKPAP GGKPRGNATP AGAPRPKSAR RRSRELALQG LYEWQVGQAD SHVVEAHMRE QEDHAKCDTA HFSALLHGCI AQVAALDAVL TPHLDRRVQE LSPVEHGVLL IGAYELQHCL DVPYKVAINE AVELAKSFGG TDGHKYVNGV LDKAAADLRP AEVAAQRNRR T
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