Gene Lcho_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2936 
SymbolribH 
ID6160114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3239067 
End bp3239531 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID641665715 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001791966 
Protein GI171059617 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG CAGACCGGGG CGTCGCCGCG GAACTCGACG GATCGGACCT GCGCGTGGCC 
ATCGTGCAGG CGCGCTTCAA TGCCGCCATC ACCGAACAGC TCGCCAGCAG CTGCATCGCC 
GAACTCGAGG CGCTGGGCGT GCTCGCCAAG CACATCAAGC ACGTCACCGT GCCCGGCGCG 
CTCGAAGTGG CGCTGGCGCT GCAGGCGCTG GCCGAGCAGA AGGACCACGA CGCGCTGATC 
GCGCTGGGCT GCATCATCCG CGGCGAGACC TACCACTTCG AGCTGGTCGC CAACGAAAGC 
GGCGCGGCGG TGACGCGGGT CTCGCTCGAA CACGGCGTGC CGATCGCCAA CGCCATCCTC 
ACGGTCGAGA ACGAGGCCCA GGCCTGGGCC CGTGCCGACG AAAAAGGCCG TGACGCCGCG 
CGTGTCGCGG TCGAGATGGC CAATCTGATG GAAGACCTCT CTTGA
 
Protein sequence
MKNADRGVAA ELDGSDLRVA IVQARFNAAI TEQLASSCIA ELEALGVLAK HIKHVTVPGA 
LEVALALQAL AEQKDHDALI ALGCIIRGET YHFELVANES GAAVTRVSLE HGVPIANAIL 
TVENEAQAWA RADEKGRDAA RVAVEMANLM EDLS