Gene Lcho_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2935 
Symbol 
ID6160113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3237919 
End bp3239010 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content70% 
IMG OID641665714 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001791965 
Protein GI171059616 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAT CTCCAATTCC CGAGCTGGTG GCCGAACTGG CCGCCGGACG CATGGTCATC 
CTCGTCGACG AGGAAGACCG CGAAAACGAA GGCGACCTGG TCCTTGCGGC CGAGATGGTC 
ACACCGGAAG CGATCAACTT CATGGCCAAG CACGGCCGTG GGCTGATCTG CCTGACGATG 
ACGCGCGAGC GCTGCGATCA CCTGCAACTG CCGCCGATGA CGCCGCGCAA CGGCACCAAG 
CACAGCACTG CGTTCACGGT CTCGATCGAA GCCCGCACCG GCGTGACCAC CGGCATCTCG 
GCCGCCGATC GCTCGCGCAC CGTCGAAGTG GCGGTGGCCC GCGACACCAC GGCCGCCGAT 
CTGGTCCAGC CCGGCCACAT CTTCCCGCTG CAGGCGCAGG ATGGCGGCGT GCTGATGCGC 
GCCGGCCATA CCGAAGCCGG CTGCGACCTC GCCCGCATGG CCGGCCTGTC GGCCTCGTCG 
GTGATCTGCG AGATCATGAA CGACGACGGC ACGATGGCGC GCCTGCCCGA GCTGGAAGTG 
TTCGCCCAGC AGCACGGCCT GAAGATCGGC ACCATCGCCG ACCTCATCAC CTACCGCAGC 
CGCAACGAAT CGCTGGTCGA GCAGCTCTCG CGCCAGCAGC TCGCCACGCC GTGGGGCGGC 
TTCGACTGCC GCACCTTCCG CGACCGCACC GGCCAGATCC ACCTGGCGCT GAGCCTGGGC 
GACTGGCAGC CCGAGGACGA AGTGCTGGTG CGCGTGCACG AGCCGCTGTC GGTGCTCGAC 
CTGCTCGACG CCAGCACCTC GCGCCATTCG TGGTCGCTGC CGCAGGCGCT GACCACGCTG 
CAGGCCACCG GCCGCGGCGT GGCCGTGCTG CTCAATGCCG GCCGCGATGC CGAGGCGCTG 
CTCGGCCAGA TCAAGCCCGA CGGCTTCGAG CCGCAGCGCG GCTCCACCGA CCTGCGCACC 
TACGGCGTGG GCGCGCAGAT CCTGCTCGAG CTCGGCGTGC GCCGCATGAA GCTGATGAGC 
AACCGCCGCC GCCTGCCCAG CATGACCGGC TACGGCCTCG AAGTGACCGG CTTCATGCCG 
ACCCCCGGCT GA
 
Protein sequence
MAISPIPELV AELAAGRMVI LVDEEDRENE GDLVLAAEMV TPEAINFMAK HGRGLICLTM 
TRERCDHLQL PPMTPRNGTK HSTAFTVSIE ARTGVTTGIS AADRSRTVEV AVARDTTAAD 
LVQPGHIFPL QAQDGGVLMR AGHTEAGCDL ARMAGLSASS VICEIMNDDG TMARLPELEV 
FAQQHGLKIG TIADLITYRS RNESLVEQLS RQQLATPWGG FDCRTFRDRT GQIHLALSLG 
DWQPEDEVLV RVHEPLSVLD LLDASTSRHS WSLPQALTTL QATGRGVAVL LNAGRDAEAL 
LGQIKPDGFE PQRGSTDLRT YGVGAQILLE LGVRRMKLMS NRRRLPSMTG YGLEVTGFMP 
TPG