| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2923 |
|---|
| Symbol | |
|---|
| ID | 6160263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3225659 |
|---|
| End bp | 3226234 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641665702 |
|---|
| Product | peptide methionine sulfoxide reductase |
|---|
| Protein accession | YP_001791953 |
|---|
| Protein GI | 171059604 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.634887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCT CGCCATCCGA TCCGACCACG CCCGCAGCGG CCAAGCCTGC CGAGACGATC
ACGCTCGGCG GCGGCTGCTT CTGGTGCCTG GAGGCGGTTT TCCTGCAGGT CGAAGGCGTC
GAGTCGGTGC AGAGCGGCTA CACCAACGGC CGGGTCGTGA ACCCGGGCTA CGAGGCGGTC
TGCGGCGGGG ACACCGGTCA CGCGGAGGTG GTGCAGTTGC GGTTTTCGCC CGACGTGATC
GATCTGGCGG AACTGCTGCG CATCTTCTTC GTCATCCACG ACCCGACCAC GCTGAACCGC
CAGGGCCATG ACGTGGGCAC GCAGTACCGC TCGGGCATCT ACTGGCACGA CCCGAAGCAG
GTCGAGGTGG CGAAGGCGGT GATGCAGGAG GCGGGGCAGG CCTGGTCGGC GCCGATCGTC
ACCGAACTGC TGGCGCTGGA CAACTACTGG CCGGCCGAGG CCTACCACCA GCGCTATTTC
GAGAACCATC CGGGCCAGGG CTACTGCGCC TACGTGATCG CGCCCAAGGT GAACAAGTTC
CGCCAGGCGT TTGCGCGGCA CCAGCGCAAG GGCTGA
|
|---|
| Protein sequence | MSASPSDPTT PAAAKPAETI TLGGGCFWCL EAVFLQVEGV ESVQSGYTNG RVVNPGYEAV
CGGDTGHAEV VQLRFSPDVI DLAELLRIFF VIHDPTTLNR QGHDVGTQYR SGIYWHDPKQ
VEVAKAVMQE AGQAWSAPIV TELLALDNYW PAEAYHQRYF ENHPGQGYCA YVIAPKVNKF
RQAFARHQRK G
|
|---|
| |