Gene Lcho_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2921 
Symbol 
ID6160261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3224083 
End bp3224733 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID641665700 
Producthypothetical protein 
Protein accessionYP_001791951 
Protein GI171059602 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.627898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG TCCGTGGCTT GCCGATGGTG GTGGTGCTTG CCGCAGGTCG GGGCGAACGC 
TTCGACGGCG AAGGGCACAA GCTGGCTCAG TCGCTGGGCC ACACCAGCGT GCTGGCCGCC 
ACGCTCGAGC AGGTGCTGGC CGCCGGATTG CCGTGTGTCG TGGTCACCAC CGCGGCGCTG 
GTGCCGCTGG CCCAGCAGGT GGTGGCGGCG CGCGACATCG TGCTGCTGCC GCCGGTGGGC 
ACGCACACCC ACGAGCCGCT CGGCATGGGC TATTCGATCG CCACCGGCGT GAGCGCACGC 
GCGCATGCCA ACGGCTGGAT GGTGCTGCCG GGCGACATGC CGCTGGTGCG GCCCGAAACG 
CTGCGCCAGG TGGCGCATGC CATGAGCCAG TACCCGGTGG TCTACGCCCA GCACCGCGGC 
CGGCGGGGTC ATCCGGTGGG CTTCTCGGCC GAGCTCTACA CCGAACTCGT CACGCTCAGC 
GGCGACGAGG GCGCACGCCG TCTGATCGCA CGCTATCCGG CGCACGGGAT CGAGGTCGAC 
GACCCCGGTG TCCTGCTCGA TGTCGACACG CAGGCCGACC TGCTCGCGGC ACGCAGTGCC 
CAGCTCAACC TGCGCTTGCC GACTGCGCCA GAGGCTGGCG CCACGGCGTG A
 
Protein sequence
MTAVRGLPMV VVLAAGRGER FDGEGHKLAQ SLGHTSVLAA TLEQVLAAGL PCVVVTTAAL 
VPLAQQVVAA RDIVLLPPVG THTHEPLGMG YSIATGVSAR AHANGWMVLP GDMPLVRPET 
LRQVAHAMSQ YPVVYAQHRG RRGHPVGFSA ELYTELVTLS GDEGARRLIA RYPAHGIEVD 
DPGVLLDVDT QADLLAARSA QLNLRLPTAP EAGATA