| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2918 |
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| Symbol | |
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| ID | 6160258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3220795 |
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| End bp | 3221418 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665697 |
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| Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase |
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| Protein accession | YP_001791948 |
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| Protein GI | 171059599 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.254472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACACAC TCAGCCTCGC CAGCCACGGC CCCGTGATCC CCGTCATCGT GCTCGACCGC
GTCGAGGACG CCGTGCCGCT GGCGCGCGCC CTGGTCGCCG GCGGCGTGCG CGTGCTGGAG
GTGACGCTGC GCACCGCCGC CGCGCTGAAA TGCATCGAGG CCATGATCGC CGAGGTGCCC
GACGCCATCG TCGGCGCCGG CACCATCCGC TCGGTGGCCG ATGCCCGCGC CGTCAAGGCA
CTGGGCTGCC AGTTCGCCGT CAGCCCGGGT TACACCAGCG AGATCGGCCG CGCCTGCCTC
GACATCGGCC TGCCGCTGCT GCCCGGCGTG TCGACCGCCA GCGAGGTCAT GATGGCCAAC
GCCGACGGCT ACCAGTTCCT CAAGCTCTTC CCGGCCACCG CGGTCGGCGG CGTCAATCTG
CTGAAGGCCT TTGCCAGCCC CTTCCACGAC GTCGCGTTCT GCCCCACCGG CGGCATCACG
CTCGAGACCG CGCCGCAGTT CCTGTCGCTG CCCAACGTCA AGGTCTGCGG CGGCTCCTGG
CTGACGCCGG CCGATGCGGT CAAGTCGGGC GACTGGGCCC GCATCACCAA GCTGGCGAGC
GAGACGCACG CGCTGCGCGC CTGA
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| Protein sequence | MNTLSLASHG PVIPVIVLDR VEDAVPLARA LVAGGVRVLE VTLRTAAALK CIEAMIAEVP
DAIVGAGTIR SVADARAVKA LGCQFAVSPG YTSEIGRACL DIGLPLLPGV STASEVMMAN
ADGYQFLKLF PATAVGGVNL LKAFASPFHD VAFCPTGGIT LETAPQFLSL PNVKVCGGSW
LTPADAVKSG DWARITKLAS ETHALRA
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