| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2914 |
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| Symbol | |
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| ID | 6159997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3212028 |
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| End bp | 3214148 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665693 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001791944 |
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| Protein GI | 171059595 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.384683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC CCGCCGCGCC ATCCGCCCCA ACCCGCCGCG CACGCCTGGG CGCCGCCTGG
CGCGAGCGTG CCGCGCAGCC CGGCCGCGAA TCGCGCGACA CCCTGTTCAT GCTCGCGGTG
CTGGCCTGGA CGCTGCTGCC GCAAGCCCCG CACGTGCCGC TCTGGTGCAG CCTGTTCAGC
GCCGCGGCGC TGCTGTGGCG CGCCGTGCTG GCCTGGCGCG TGCGTCCGCT GCCGCCGCGC
TGGCTGCTGA TCCTGCTGCT GCTGGCCTGC ATCGGCGCCA CCGTGCTGAC CTACCGCAGC
CTGACCGGCA AGGAGGCCGG CCTGGCGCTG CTGGTGCTGC TGACCGCGCT CAAGACGCTG
GAGCTGCGGG CCCGCCGCGA CGCGCTGGTG CTGTTTTTCC TCGGCTTCTT CCTGGTGCTG
GCGAACTTTT TGCACTCGCA GTCGCTCGCC ACCGCGGTCG CGATGGTGCT GTCGGTCTGG
GGGCTGCTGG CCGCGCTGGT GCTGGCGCAC ATGCCGGTCG GGCGGCCGCG GCTGGCGCAG
GTGGCGGGGT TGGCGGGGCG CATGCTGGTG CTGGGCGCAC CGCTGATCGC GGCGCTGTTC
ATCTTCTTCC CGCGCATGGC GCCGCTGTGG GGCGTGCCGG GCGAGGCCGG CGGGCGCACC
GGCCTGTCGG ATCAGCTGCA GCTCGGCGAC GTGGCCGAGC TGGCGCTGGA CGACAGCACC
GCGCTGCGGG TGCGTTTTTT CGGCCCGGCG CCGGCCGCGT CGACGCTCTA TTTCCGCGGC
CCGGTGCTGA GCCTGCCCGA CGGCCAGCGC TGGGTCGCGC TGCCGTGGCG GCCGGGTGAC
ACCAGCCTGG CGCTGCCGAA TCCGTCGCCG CGCGACACCG CGCTGGCCTA CGAGATGACG
GTCGAGCCGC TGCGCGTGTC GACGCTGCCG CTGCTCGAAA CCAGCGTCAG CCGGCCGCAG
GTCGACAGCG GCGAGGTCGA GCTCTACGCC CACCCCGACG GCCAGTGGAT CACCGGCCGG
CCGATCGCCG AGCGCGTGCG GCTGCAGGCA CAGGCCGCCG TGCGCTCGCG TGCCGCCGCG
TCGCCCGAGG GCCTGCTGCC GACCTATCTG CAGCTGCCGC CCGGCCAGCA CCCGCGCAGC
ATCGCCTGGG CCCAGGCGCT GCGCAGCCAG CCGGCCTTCG CGCAGGCCAG CCCGAACCAG
CTCGCCGATC TGCTGGCGGT GGCGCTGGTC GTGCACATCC GCCAGGGCGG CTACAGCTAT
ACGCTGGCGC CGGGCACCTA TGGCGAGCAG CCGCTCGACG CCTTCTGGCT CGACCGCCGC
GAGGGCTTCT GCGAGCACTT CGCCACCGCC TTCGTGGTGC TGATGCGGGC GATGGGCGTG
CCCGCGCGCA TCGTCACCGG CTACCAGGGC GGCCAGTTCA ACCCGATCGA CGGCGTGCTC
GAGGTGCGCC AGAGCGACGC CCACGCCTGG GCCGAATACT GGCGCGCCGG CGACGGCTGG
GTGCGCGTCG ACCCCACCGC CGCGGTGGCG CCCGACCGCA TCCAGCGCAG CCAGCGGCTG
GCCCCGCCGC GCGGGCTGAT GGCCGGTGCG CTGGCGCAGG TCGACCCGGC GCTGCTGGCG
CGCGTGCGCG CGGTCTGGGG TGCGCTCGAC CACCAGTGGA ACCAGTGGGT GCTCAGCCAC
GGCCGCCAGC GCCAGCTCGA CCTGCTGCGT GCGCTGGGCT GGCAGTCGCC CGATCTGGCG
GATCTGGGCC GGCTGCTGGC GATCGGGCTG GCCGGGCTCG CCCTGCTGGG CGCGGCGTTG
GGCGCCTGGC AAGCGCGCCG GGTGCGTCAG CGCGACCCCT GGCTGCGCGC CTACGCCGGC
GTGCGCAAGG CGCTCATGCA GCGTGGCATC GACTGCCCGG CGCACCTGCC GCCGCGCAGC
CTGGCCGCGG CGCTGCGCCG GCAACACGGC ACGGCCGCCG AGACACTGGC CGCCGCGCTG
CTGGCGCTGG AGGCCTGGCG CTACCAGGCG CCGTCCGGTG CGGCGACCGA CCGGCGTACC
CTTGGCGAGC TGCGCCGCCG GGCCCTCGCC GCCGCCCGCA CGATGGCGCG TCAGCCCGCT
GAAAATCGAT CTTCCACCTG A
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| Protein sequence | MNSPAAPSAP TRRARLGAAW RERAAQPGRE SRDTLFMLAV LAWTLLPQAP HVPLWCSLFS
AAALLWRAVL AWRVRPLPPR WLLILLLLAC IGATVLTYRS LTGKEAGLAL LVLLTALKTL
ELRARRDALV LFFLGFFLVL ANFLHSQSLA TAVAMVLSVW GLLAALVLAH MPVGRPRLAQ
VAGLAGRMLV LGAPLIAALF IFFPRMAPLW GVPGEAGGRT GLSDQLQLGD VAELALDDST
ALRVRFFGPA PAASTLYFRG PVLSLPDGQR WVALPWRPGD TSLALPNPSP RDTALAYEMT
VEPLRVSTLP LLETSVSRPQ VDSGEVELYA HPDGQWITGR PIAERVRLQA QAAVRSRAAA
SPEGLLPTYL QLPPGQHPRS IAWAQALRSQ PAFAQASPNQ LADLLAVALV VHIRQGGYSY
TLAPGTYGEQ PLDAFWLDRR EGFCEHFATA FVVLMRAMGV PARIVTGYQG GQFNPIDGVL
EVRQSDAHAW AEYWRAGDGW VRVDPTAAVA PDRIQRSQRL APPRGLMAGA LAQVDPALLA
RVRAVWGALD HQWNQWVLSH GRQRQLDLLR ALGWQSPDLA DLGRLLAIGL AGLALLGAAL
GAWQARRVRQ RDPWLRAYAG VRKALMQRGI DCPAHLPPRS LAAALRRQHG TAAETLAAAL
LALEAWRYQA PSGAATDRRT LGELRRRALA AARTMARQPA ENRSST
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