Gene Lcho_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2912 
Symbol 
ID6159995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3209889 
End bp3210938 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID641665691 
ProductATPase 
Protein accessionYP_001791942 
Protein GI171059593 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.275117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGAA TGATGAGGCC AACGGATCAC CTGCAACTGA CGCCTGCCAC CGCCGGTGGC 
GCTGCCACAA CGCCACGCCA TGACCTGGCT CAAGGTCTGT CGCACAGGCC CGCCCGGGCG
CCGCTGGCCC TCGTTCTCGA CCGCCTCTTG CACCAGATTA GCACGGTGGT GGTGGGCAAA
CCGGCGCAGA TCCGCGACGG CGTCGCCTGC CTTCTGGCCG GTGGCCATCT GCTGATCGAG
GACCTGCCCG GCGTCGGCAA GACCACCCTC GCGCACACGC TGGCGGTGTC GATGGGGCTG
CGGTTTTCGC GCGTGCAGTT CACCGCCGAC CTGATGCCCA GCGACCTGAT CGGCGTCAGC
GTGTTCGAGC GCGGACGGGT CGGTTCGGGC GATGCCTTCG TGTTCCACCC CGGCCCGCTG
TTCACGCAGG TGCTGCTGGC CGACGAGATC AACCGCGCCG GCCCGCGCAC GCAGAGCGCG
CTGCTGGAGG CGATGGAAGA ACACCAGGTC AGCGTCGACG GTCAGAGCCA CCCGCTGCCG
GCGCCGTTCT TCGTCATCGC GACGCAGAAC CCGGCCGAGC AGCTGGGCAC CTACCCGCTG
CCCGAGAGCC AGCTCGACCG CTTCCTGATG TGCCTGAGCC TCGGCTATCC CGACGCCGCG
GCCGAGCGCG AGCTGCTGGT CGGCACCGAC CGGCGCACCG CCATCCGCGA GCTGCAGCCG
GTGATGAACG GCGAGCAGCT GCTGGCCGCG CAGGCCGCGG TGCTGCAGGT GCACGCCGCG
CCGGCCCTGC TCGACTACCT GCAGGCGCTG ATCGCCGCCA CCCGCTCGGG CGCCTGGTTC
ACGCAGGGCC TGTCGCCACG CGCCGGCCTG GCCTGGCTGC GCGCCGCCCG CGCCCGCGCC
CTGCTCGACG GCCGCGACCA CGTCGTGCCC GACGACCTGC AGGCGGTCGC GGTGCCGGTG
CTCGCGCACC GCCTGCTGCC GCGTGCCGGC GCCGGGCGCG GCCGCGCCGC GCAGGTGCAG
GCGATGCTGG AGCACGTGGG GCTGGTCTGA
 
Protein sequence
MVRMMRPTDH LQLTPATAGG AATTPRHDLA QGLSHRPARA PLALVLDRLL HQISTVVVGK 
PAQIRDGVAC LLAGGHLLIE DLPGVGKTTL AHTLAVSMGL RFSRVQFTAD LMPSDLIGVS
VFERGRVGSG DAFVFHPGPL FTQVLLADEI NRAGPRTQSA LLEAMEEHQV SVDGQSHPLP
APFFVIATQN PAEQLGTYPL PESQLDRFLM CLSLGYPDAA AERELLVGTD RRTAIRELQP
VMNGEQLLAA QAAVLQVHAA PALLDYLQAL IAATRSGAWF TQGLSPRAGL AWLRAARARA
LLDGRDHVVP DDLQAVAVPV LAHRLLPRAG AGRGRAAQVQ AMLEHVGLV