| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2900 |
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| Symbol | |
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| ID | 6160081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3192818 |
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| End bp | 3194482 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665679 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001791930 |
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| Protein GI | 171059581 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0196259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAT ACGTATTCAC CATGAACCGC GTCGGCAAGA TCGTGCCGCC GAAGCGGCAG
ATCCTGAAGG ACGTCTCGCT GTCCTTCTTC CCCGGCGCCA AGATCGGCGT GCTGGGCATC
AACGGCTCGG GCAAGTCGAC CTTGCTCAAG ATCATGGCTG GCATCGACCG CGACATCGAA
GGTGAAGCCA CCGCGATGCC CGATCTGCGC ATCGGCTACC TGCCGCAGGA GCCGCAGCTC
GACCCGAACG CCACCGTGCG CGAGGCGGTC GAGCAGGGCA TCGGCGGCGT GCTGGCCGCC
AAGCAGCGGC TCGACGAGGT CTACGCAGCC TATGCCGACG AAGACGCCGA TTTCGACGCG
CTGGCCGCCG AGCAGGCCCA GCTCGAGGCC GTGATCGCCG CAGCCGGCAG CGAGAACACC
GAGATGCAGC TCGAGATCGC CGCCGACGCG CTGCGCCTGC CGCCGTGGGA GGCCAACATC
GGCAAGCTCT CGGGTGGTGA GAAGCGCCGC GTCGCGCTGT GCCGCCTGCT GCTGTCCAAG
CCCGACATGC TGCTGCTCGA CGAACCCACC AACCACCTGG ACGCCGAGTC GGTCGAGTGG
CTGGAGCAGT TCCTGAGCCG CTTCCCCGGC ACCGTGGTGG CCATCACCCA CGATCGCTAC
TTCCTCGACA ACGCCGCCGA GTGGATCCTG GAGCTCGACC GCGGACGTGG CATCCCCTAC
GAAGGCAACT ACTCGACCTG GCTCGAGCAG AAGGAAAAGC GCCTCGAGCT GGAGCAGCGC
ACCGAGGACG CCCGCACCAA GGCGATGAAG ATCGAGCTGG AATGGGTGCG CAAGAACGCC
AAGGGCCGCC AGGCCAAGAG CAAGGCGCGC CTGGCCCGCT TCGAGGAACT GAGCGACTTC
GACTACCAGA AGCGCAACGA GACGAACGAG ATCTTCATCC CGGTGGCCGA GCGCCTGGGC
ACCGAGGTGA TCGAGTTCAC CAACGTCAGC AAGAGCTTCG GCGACCGGGT GCTGATCGAC
AACCTGAGCT TCAAGGTGCC GATGGGTGCG ATCGTCGGCA TCATCGGCCC GAACGGCGCC
GGCAAGTCGA CGCTGTTCCG CATGATCTCG GGCAAGGAGC AGCCGGATGC GGGCGAGGTC
AAGATCGGCA AGACCGTCAA GATGGCCTTC GTCGACCAGA GCCGCGAATC GCTCGAAGGC
GACAAGACGG TCTGGGAAGA CCTGTCGGGC GGGCTCGACA ACCTGGTGGT CGGCAAGTTC
GTGATGCCCA GCCGGGCGTA TCTGGGCCGC TTCAACTTCA AGGGCAACGA CCAGCAGAAG
CTGGTCAAGA ACCTCTCGGG CGGTGAGCGC GGTCGTCTGC ACCTGGCCAA GACCCTGGCC
ACTGGCGGCA ACGTGCTGAT GCTCGACGAA CCGTCCAACG ACCTCGACGT CGAAACCCTG
CGCGCGCTCG AAGACGCGCT GCTCGAGTTC GCCGGCTCGG CGATGGTGAT CAGCCACGAT
CGCTGGTTCC TGGACCGCAT CGCCACGCAT ATCCTGGCCT GCGAAGGCGA TTCGCAATGG
TTCTTCTACC AGGGCAACTA TCAGGAATAT GAAGCCGACA AGAAGAAGCG CCTGGGCGAA
GAAGGTGCGC GACCCAAGCG TGTGCGTTAC AAGGCCCTGA AATAA
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| Protein sequence | MAQYVFTMNR VGKIVPPKRQ ILKDVSLSFF PGAKIGVLGI NGSGKSTLLK IMAGIDRDIE
GEATAMPDLR IGYLPQEPQL DPNATVREAV EQGIGGVLAA KQRLDEVYAA YADEDADFDA
LAAEQAQLEA VIAAAGSENT EMQLEIAADA LRLPPWEANI GKLSGGEKRR VALCRLLLSK
PDMLLLDEPT NHLDAESVEW LEQFLSRFPG TVVAITHDRY FLDNAAEWIL ELDRGRGIPY
EGNYSTWLEQ KEKRLELEQR TEDARTKAMK IELEWVRKNA KGRQAKSKAR LARFEELSDF
DYQKRNETNE IFIPVAERLG TEVIEFTNVS KSFGDRVLID NLSFKVPMGA IVGIIGPNGA
GKSTLFRMIS GKEQPDAGEV KIGKTVKMAF VDQSRESLEG DKTVWEDLSG GLDNLVVGKF
VMPSRAYLGR FNFKGNDQQK LVKNLSGGER GRLHLAKTLA TGGNVLMLDE PSNDLDVETL
RALEDALLEF AGSAMVISHD RWFLDRIATH ILACEGDSQW FFYQGNYQEY EADKKKRLGE
EGARPKRVRY KALK
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