Gene Lcho_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2897 
Symbol 
ID6160078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3191306 
End bp3191866 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content69% 
IMG OID641665676 
ProductRDD domain-containing protein 
Protein accessionYP_001791927 
Protein GI171059578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.01858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG TGAACCTGGC CGGAGAGCCA AGCGGCACGG CCCGCACCGA AAACACCCCC 
GCCGCGGCCA ATATCCCCAC CCTGCGCCGC CGCCTGGCTG CCATGGTCTA CGAGGGCGTG
CTGCTGTTCG GCGTGGTGAT GATCGCGGGC TTTGTCTATT CGGTCCTGAC CCAGCAGCGG
CACGCCCTCG CCGGCCGCCA CGGCATGCAG GCCTTCATGT TCGTGGTGCT GGGCGTCTAC
TTCAGCTGGT TCTGGGCCAG AGGGCGCCAG ACCGTGGCGA TGAAGACCTG GCAGTTGCAC
CTGCAGACCG CCAGCGGCGA AGACGTCTCG CAGACCCGGG CCGCAGCCCG CTACCTGCTG
AGCTGGCTGT GGTTCCTGCC GGCCCTGCTG GTGGCCGAAC TGGCCGGCTG GCACAGCAGC
CGCGACGTAT CCGGCGCGCT GATCGTCGGC GTGCTGGCGT ACGCCGGCCT GAGCTGGTGG
ATGCCGCAGC GCCAGTTCCT GCATGACCGG CTGTGCGGCA CGCGTCTGGT CCATCTGCCG
CGCGCCGCCA GATCACGCTG A
 
Protein sequence
MNPVNLAGEP SGTARTENTP AAANIPTLRR RLAAMVYEGV LLFGVVMIAG FVYSVLTQQR 
HALAGRHGMQ AFMFVVLGVY FSWFWARGRQ TVAMKTWQLH LQTASGEDVS QTRAAARYLL
SWLWFLPALL VAELAGWHSS RDVSGALIVG VLAYAGLSWW MPQRQFLHDR LCGTRLVHLP
RAARSR