| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2893 |
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| Symbol | |
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| ID | 6160205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3187432 |
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| End bp | 3189210 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665672 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_001791923 |
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| Protein GI | 171059574 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0020584 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACATGT CTGCCGCGGA ACACAAGCGT GCCGCATCGG CACAAGCCTC CCGCGATTCT
TCTTCCGCCG AACTCAACGG TTCGGAAATC CTCGTGCGCT GCCTGCAGGC CGAGGGCGTG
CAATACATGT GGGGCTACCC TGGCGGGTCG GTGCTCTACA TCTACGACGC ACTCTACAAG
CAAGACACCA TCCAGCACGT GCTGGTGCGC CATGAGCAGG CCGCCGTGCA CGCGGCCGAC
GGCTATGCGC GCGCCACCGG CGACGTCGGC GTCGCGCTGG TGACGTCGGG CCCGGGCGTG
ACCAATGCCG TGACCGGCAT CGCCACCGCC TACATGGACT CGATCCCGAT GGTGATCATC
ACCGGCCAGG TGCCCACGCC GGCGATCGGA CTGGATGCCT TCCAGGAGTG CGACACCGTC
GGCATCACGC GCCCGATCGT CAAGCACAAC TTCCTGGTCA AGGACGTGCG CGACCTGGCG
CTGACGATCA AGAAGGCCTT CCACATCGCC CGCACCGGCC GTCCGGGCCC GGTGGTGATC
GACATCCCGA AGGATGTCTC GCTCAACAAG ACCGCCTTCC ACTATCCCGA GACGGTGGAA
ATGCGCTCCT ACAACCCGGT GCGCAAGGGC CACGGCGGCC AGATCCGCAA GGCCGTGCAG
CTGCTGCTCG GCGCCAAGCG TCCGTACATC TACACCGGTG GCGGCGTGAT CCTGGGCAAT
GCCTCGGCCG AGCTGCGCGA ACTGGCCGAC CTGCTGGGTT ACCCGGTCAC CAACACGCTG
ATGGGCCTGG GCGCGATGCC GGCCACCGAC CCGCGCTTCC TGGGCATGCT GGGCATGCAC
GGCACCTACG AAGCCAACAT GACGATGCAG AACTGCGACG TCCTGCTGGC CGTGGGCGCG
CGTTTCGATG ACCGCGTGAT CGGCAACCCG AAGCACTTTG CCAGCGTCGA GCGCAAGATC
ATCCACGTCG ACATCGACCC GTCGTCGATC TCCAAGCGCG TCAAGGTCGA CATCCCGATC
GTCGGCGACG TCAAGGACGT GCTGCAGGAA CTGATCGCAC AGATCCGCGA GTCGCAGCAG
CGCGCCGAAC CGGCTGCGCT GAACGCCTGG TGGTCGCAGA TCAACGACTG GCGCAAGCAG
GACTGCCTGA GCTACAAGGG CTCCGACGAG GTCATCAAGC CGCAGTTCGT GGTCGAGACG
CTCTGGAACC TGACGCGCGG CTCCGACAGC TACATCACCT CGGACGTCGG CCAGCACCAG
ATGTGGGCGG CGCAGTACTT CAAGTTCGAC GAGCCGCGCC GCTGGATCAA CTCCGGCGGC
CTGGGCACGA TGGGCGTGGG CCTGCCGTAC GCGATGGGCA TCAAGCTGGC CAAGCCCGAT
GCGGACGTGT TCTGCATCAC CGGCGAAGGC TCGATCCAGA TGAACATCCA GGAGCTCTCG
ACCTGCCAGC AGTACAGCAC GCCGGTCAAG GTCATCGCCC TGAACAACCG CTACCTCGGC
ATGGTGCGGC AGTGGCAGCA GCTCGAATAC AGCAGCCGCT ACTCGCACAG CTACATGGAT
GCACTGCCCG ACTTCGTCAA GCTGGCCGAG GCCTATGGCC ACATCGGCCT GAAGATCGAG
CGGCCGTCCG AGGTGGAGCC GGCGCTCAAG GAGCTGATCC GCCTGAAGGA CCGCACGGTC
TTTCTCGACG TGCGCACCGA CCCGACCGAA AACGTCTGGC CGATGGTCAA GGCGGGCAAG
GGCATCACCG AGATGCTGCT GGGTTCCGAG GAGCTGTGA
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| Protein sequence | MDMSAAEHKR AASAQASRDS SSAELNGSEI LVRCLQAEGV QYMWGYPGGS VLYIYDALYK
QDTIQHVLVR HEQAAVHAAD GYARATGDVG VALVTSGPGV TNAVTGIATA YMDSIPMVII
TGQVPTPAIG LDAFQECDTV GITRPIVKHN FLVKDVRDLA LTIKKAFHIA RTGRPGPVVI
DIPKDVSLNK TAFHYPETVE MRSYNPVRKG HGGQIRKAVQ LLLGAKRPYI YTGGGVILGN
ASAELRELAD LLGYPVTNTL MGLGAMPATD PRFLGMLGMH GTYEANMTMQ NCDVLLAVGA
RFDDRVIGNP KHFASVERKI IHVDIDPSSI SKRVKVDIPI VGDVKDVLQE LIAQIRESQQ
RAEPAALNAW WSQINDWRKQ DCLSYKGSDE VIKPQFVVET LWNLTRGSDS YITSDVGQHQ
MWAAQYFKFD EPRRWINSGG LGTMGVGLPY AMGIKLAKPD ADVFCITGEG SIQMNIQELS
TCQQYSTPVK VIALNNRYLG MVRQWQQLEY SSRYSHSYMD ALPDFVKLAE AYGHIGLKIE
RPSEVEPALK ELIRLKDRTV FLDVRTDPTE NVWPMVKAGK GITEMLLGSE EL
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