Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2886 |
Symbol | |
ID | 6160157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3179128 |
End bp | 3179898 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665665 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001791916 |
Protein GI | 171059567 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.187395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA AAGACGGTCA CACCCCGACG ATCCAGGTAC TGGAGCGGGT GTTCCATCTG CTGGACGTGC TGGCCACGCA CCAGGATCCG GTATCGCTCA AGCAGATCAG CGAGCATACC GGGCTGCATC CGTCAACAGC CCATCGCATC CTCAACGACC TGGTGGCGGG GCGCTTTGTC GACCGCCCCG AGGCGGGCAG CTACCGGCTG GGCATGCGCT TGCTGGAACT CGGCAACCTC GTCAAGGCCA GGCTCGACGT GCGCGACGCG GCACTGGGGC CGATGCGAGA ACTCCACAAG CTCACGCATC AGCCCGTCAA CCTGTCCGTG CGGCAAGGCG ACGAGATCGT CTACATCGAA CGCACCTATT CCGAGCGCTC CGGCATGCAG GTGGTGCGCG CCGTCGGTGG CCGGGCGCCA CTGCATCTGA CATCGGTCGG CAAGCTCTTC CTGGCCCACG ACGACCCGCA ACGGGTTCGT GCCTACGCCA CGCGCACCGG CCTGGCCGGC CACACGCGCA ACAGCATCAC CGATCTGCCG CAACTCGAGC GTGATCTCGC CAAGGTCAGG CAGACCACGC TGGCACGGGA CAACGAAGAA CTGGAACTGG GCGTGCGCTG CATGGCAGCA GGCATCTTCG ACGATCAGGG CCGGCTGATC GCGGGGTTGT CGATTTCGGC ACCGACCGAC CGCCTTGAAG AAGGCTGGAG CGAACGACTC CGGGAAACGG CCAGCCAGAT CTCGAAGGCC CTGGGCTATC TGCCGGCCTG A
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Protein sequence | MIKKDGHTPT IQVLERVFHL LDVLATHQDP VSLKQISEHT GLHPSTAHRI LNDLVAGRFV DRPEAGSYRL GMRLLELGNL VKARLDVRDA ALGPMRELHK LTHQPVNLSV RQGDEIVYIE RTYSERSGMQ VVRAVGGRAP LHLTSVGKLF LAHDDPQRVR AYATRTGLAG HTRNSITDLP QLERDLAKVR QTTLARDNEE LELGVRCMAA GIFDDQGRLI AGLSISAPTD RLEEGWSERL RETASQISKA LGYLPA
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