| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2885 |
|---|
| Symbol | |
|---|
| ID | 6160156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3177810 |
|---|
| End bp | 3178823 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641665664 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001791915 |
|---|
| Protein GI | 171059566 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.386672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCTT CGGCGCCGGT GCGGCGGACG TTCGCGCAGG CGCCCCGGGT GATCGGGCGC
GTCATGCCGG CCGAACTGGG GGTGGTGATC AATACCGCCG ATCCGTATTC GGTCGAGGTG
GGCGAGTACT ACGTGCGCCA GCGGCAGATA CCCGCAGCTC ACGTGCTGCG GTTGGAACTG
TCCACGCAAG CCCGCCTTTC CGTTCCTGAA TTCGATGTCC TGAAGCGGCA TGTCGATGCG
CATTTCGGGT CGCAGGTGCA GGCGCTGGCG CTGACCTGGG TGCAGCCCTA CGCCGTCTCC
TGCATGTCGA TCACCGCAGC GCTGGCGCTG GGGATCGACG ACGAACTGTG CCGCAGCACA
TGCGGCAAGA CCTCGCTGTC GCCGTATTTC AACTCGGCCA GCGGGCAACC GTTTCGTGAT
CACGGATTCC GTCCGTCGAT GCTGGTGGCC GCCGGCAGCG CCGCCTCGGC CCGCCAGTTG
ATCGATCGCG GCATCGCGGC TGACGCGAGC CTCGGCTTGC GGGGTGCGAT TCCGGTGGAC
GCCTATTTCA TGGCCACCAC CGATGCCGCG CGCAATGTGC GAGCGCCGAT GTTTCCGCCG
CCGGGCCTGG TGCCGCGCGC CGGGGTGGCG ATCAAGCTTG CACAAGGCGA TCTGCCCCGC
GGACAGGATC GGCTTCTGAT GGTCCAGACC GGTCTGGCGG TGCTCGATGG CCTCGACACG
CTGGGCTGGG TGCCCGGCGC ATTGGGGGAT CACCTGACGT CGTATGCCGG CCAACTCGAT
CAGCTGTCCG GTCAGACCAC CGCCCTGGCG TGGATCGACT CGGGCGCGAC CGCCAGTTAC
GGCACGGTCA GCGAGCCCTG CAACCACCCG CAGAAATTCC CCGACCCGCA ACTCGTGTTG
CTGCACTACA TGCAGGGCAG CACGCTGATC GAGGCGTACT GGAAGAGCGT GCGCTGGCCG
CAGCAGGGCG TTTTCGTGGG CGAGCCCTTG GCGGCTCCGT TTGCCCGCCG CTGA
|
|---|
| Protein sequence | MPASAPVRRT FAQAPRVIGR VMPAELGVVI NTADPYSVEV GEYYVRQRQI PAAHVLRLEL
STQARLSVPE FDVLKRHVDA HFGSQVQALA LTWVQPYAVS CMSITAALAL GIDDELCRST
CGKTSLSPYF NSASGQPFRD HGFRPSMLVA AGSAASARQL IDRGIAADAS LGLRGAIPVD
AYFMATTDAA RNVRAPMFPP PGLVPRAGVA IKLAQGDLPR GQDRLLMVQT GLAVLDGLDT
LGWVPGALGD HLTSYAGQLD QLSGQTTALA WIDSGATASY GTVSEPCNHP QKFPDPQLVL
LHYMQGSTLI EAYWKSVRWP QQGVFVGEPL AAPFARR
|
|---|
| |