| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2884 |
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| Symbol | sucA |
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| ID | 6160155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3174696 |
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| End bp | 3177548 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665663 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001791914 |
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| Protein GI | 171059565 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.554581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGC AATACAGGAC GAACTCGTAC CTGTTCGGGG GCAACGCCCC TTACGTGGAA
GAGATGTACG AGGCTTACCT CGACAACCCA GGCTCCGTTC CGGACAACTG GCGCGCCTAC
TTCGACGCAC TCCAGCACGT TCCCGCCACC GACGGCACCG ACAGCCGTGA CGTGGCTCAC
GCCCCCGTCA TCGAATCGTT CGCCCAGCGC GCCAAGTCGA ATGCCTTCGC CGTCAAGGCC
AGCTCGACCG ATCTCGCCGT CGCGCGCAAG CAGGTTCACG TCCAGTCGCT GATCGCGGCC
TACCGCAACG TCGGTGCCCG CTGGGCCGAT CTCGACCCGC TCAAGCGCCA GGAGCGTCCG
AAGATCCCCG AACTCGAGCC GGCGTTCTAC GACCTGACCG AGTCCGACAT GGACATCACG
TTCAGCGCGA CGAACACCTA TTTCGGCAAG GCGGACATGT CGCTGCGCCA GATCCTGCAG
GCTCTGCGCG AGACCTACTG CAGCACGCTC GGCGCCGAGT TCATGCACAT CACCGACCAG
ACGCAGAAGC GCTGGTGGCA AGAGCGGCTC GAGAGCATCC GTGCCAAGCC GACCTTCAAT
GTCGAGCAGA AGAAGCACAT CCTCGACCGC CTGACCGCGG CCGAAGGCCT GGAGCGCTTC
CTCCACACCA AGTACGTCGG CCAGAAGCGC TTCTCGCTCG AAGGTGGCGA AAGCTTCATC
GCCGCGATGG ACGAGCTGGT GCAGCGTGCC GGCGAGAAGG GCGTGCAGGA GATCGTCATC
GGCATGGCCC ACCGCGGCCG CCTGAACGTG CTCGTCAACA CCCTGGGCAA GATGCCCAAG
GACCTGTTCG CCGAATTCGA CCACACCGCG CCCGAAGACC TGCCGGCCGG CGACGTCAAG
TACCACCAGG GCTTCAGCTC CGACATCTCG ACCCCGGGCG GCCCGGTCCA CCTGTCGCTG
GCCTTCAACC CCTCGCACCT GGAAATCGTC AACCCGGTCG TCGAAGGCTC GGTGCGTGCG
CGCCAGGACC GTCGCGGCGA TACCATCGGC GCCCAGGTGC TGCCGGTGCT GGTGCACGGC
GACTCGGCCT TCGGTGGCCA GGGCGTCAAC CAGGAAACCC TGGCGCTGTC CGAGACGCGT
GGTTATTCCA CCGGCGGCAC GGTGCACCTG ATCATCAACA ACCAGATCGG CTTCACCACC
AGCGACCCGC GCGACCTGCG CTCGACGCTG TACTGCACCG ACATCGTCAA GATGATCGAT
GCCCCGGTGC TGCACGTGAA CGGTGACGAT CCGGAAGCCG TCGTGCTGGC CACCCAGCTG
GCGCTCGAGT TCCGCATGGC CTTCCGCAAG GACGTGGTCA TCGACGTCAT CTGCTTCCGC
AAGCTCGGCC ACAACGAGCA GGACACGCCG GCGCTGACCC AGCCGCTGAT GTACAAGAAG
ATCAGTGCCC ACCCCGGCAC CCGTCGCCTG TACGCCGACA AGCTGGCCGC CCAGGGTCTG
GGCGAGACCA TCGGCGACGA CATGTCCAAG GCCTATCGCG CCGCGATGGA CGAAGGCCGT
CACACGGTCG ATCCGGTCAT CAGCAACTTC AAGAGCAAGT ACGCGGTCGA CTGGGTTCCG
TTCCTGGGCA AGAAGTGGAC CGACGCGGCC GACACCGCGA TTCCGCTGAC CGAGTGGAAG
CGTCTGGCCG AGCGCCTGAC CACCATTCCC GCCAGCGTCA GCCCGCACCC GCTGGTCAAG
AAGGTCTTCG ACGACCGCGC CGCGATGGGC CGTGGCGAGA TCAACGTCGA CTGGGGCATG
GGCGAGCACA TGGCGTTTGC CTCGCTGGTG GCTGCCGGGT ATCCGGTGCG CCTGTCGGGC
GAGGACTGCG GCCGTGGCAC CTTCACGCAC CGCCATGCCG TGATCCATGA TCAGAAGCGC
GAGAAGTGGG ACGAAGGCAC CTACATCCCG CTGCAGCACG TCGGCGACAA CCAGGCCGGT
TTCACCGTCA TCGACTCGAT CCTGTCGGAA GAGGCGGTGC TGGGCTTCGA ATACGGCTAC
GCCGCCGCCG AACCCAACAC GCTGACGATC TGGGAAGCGC AGTTCGGCGA CTTCGCCAAC
GGCGCGCAGG TCGTGATCGA CCAGTTCATC GCCTCGGGCG AAGTCAAGTG GGGCCGCGTC
AACGGCCTGA CGCTGATGCT GCCGCACGGC TACGAAGGCC AGGGCCCCGA GCACAGCTCG
GCACGCCTGG AGCGCTTCAT GCAGCTGGCC GCCGACACCA ACATGCAGAT CGTGCAGCCG
ACCACGGCCA GCCAGATCTT CCATGTGCTG CGTCGCCAGA TGGTGCGCCA GTTCCGCAAG
CCGCTGGTCA TCATGACGCC GAAGTCGCTG CTGCGTAACA AGGACGCCAC CTCGACGCTG
GTCGAGTTCA CCAAGGGCGA GTTCCGCACC GTCATCGGCG AGCTCAATAC CGGCATCGAC
GCAGCCAAGG TCAAGCGCGT GATCGCCTGT TCGGGCAAGG TCTATTACGA CCTGGTCAAG
AAGCGCGACG AGAAGAAGAG CAACGACGTG GCGATCATCC GCGTCGAGCA GCTCTATCCC
TTCCCGCACA AGGCCTTCGC CAACGAGCTC AAGAAGTACC CGAACGCGAA CGACATCGTG
TGGTGCCAGG ACGAGCCGCA GAACCAGGGT GCCTGGTTCT TCGTGCAGCA CTACATCCAC
GAGAACATGC AGGACGGCCA GAAGCTCGGC TACGCCGGTC GCCCCGCATC GGCTTCGCCG
GCCGTGGGTT ACGCCCACCT GCACCAGGAA CAGCAGAAGG CTCTGCTCGA CCAGGCATTC
GGCAAGCTCA AGGGCTTCGT CCTGACCAAG TGA
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| Protein sequence | MMQQYRTNSY LFGGNAPYVE EMYEAYLDNP GSVPDNWRAY FDALQHVPAT DGTDSRDVAH
APVIESFAQR AKSNAFAVKA SSTDLAVARK QVHVQSLIAA YRNVGARWAD LDPLKRQERP
KIPELEPAFY DLTESDMDIT FSATNTYFGK ADMSLRQILQ ALRETYCSTL GAEFMHITDQ
TQKRWWQERL ESIRAKPTFN VEQKKHILDR LTAAEGLERF LHTKYVGQKR FSLEGGESFI
AAMDELVQRA GEKGVQEIVI GMAHRGRLNV LVNTLGKMPK DLFAEFDHTA PEDLPAGDVK
YHQGFSSDIS TPGGPVHLSL AFNPSHLEIV NPVVEGSVRA RQDRRGDTIG AQVLPVLVHG
DSAFGGQGVN QETLALSETR GYSTGGTVHL IINNQIGFTT SDPRDLRSTL YCTDIVKMID
APVLHVNGDD PEAVVLATQL ALEFRMAFRK DVVIDVICFR KLGHNEQDTP ALTQPLMYKK
ISAHPGTRRL YADKLAAQGL GETIGDDMSK AYRAAMDEGR HTVDPVISNF KSKYAVDWVP
FLGKKWTDAA DTAIPLTEWK RLAERLTTIP ASVSPHPLVK KVFDDRAAMG RGEINVDWGM
GEHMAFASLV AAGYPVRLSG EDCGRGTFTH RHAVIHDQKR EKWDEGTYIP LQHVGDNQAG
FTVIDSILSE EAVLGFEYGY AAAEPNTLTI WEAQFGDFAN GAQVVIDQFI ASGEVKWGRV
NGLTLMLPHG YEGQGPEHSS ARLERFMQLA ADTNMQIVQP TTASQIFHVL RRQMVRQFRK
PLVIMTPKSL LRNKDATSTL VEFTKGEFRT VIGELNTGID AAKVKRVIAC SGKVYYDLVK
KRDEKKSNDV AIIRVEQLYP FPHKAFANEL KKYPNANDIV WCQDEPQNQG AWFFVQHYIH
ENMQDGQKLG YAGRPASASP AVGYAHLHQE QQKALLDQAF GKLKGFVLTK
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