Gene Lcho_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2874 
Symbol 
ID6159749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3164349 
End bp3164969 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID641665653 
Productsegregation and condensation protein B 
Protein accessionYP_001791904 
Protein GI171059555 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC AGGATGCCAA ACGCGTCCTC GAGACGGCGC TCATCTGCGC GCATCAGCCC 
TTGCCGCTGC GCGAGATGCG GGTGCTGTTC GATGGCGAAA TCGGTGCCGA CACGCTGCGG 
CACCTGCTCG ATGAACTGGG TCGCGACTGG CGCGATCGCG GCGTCGAACT GGTCTGCGTC 
GCCAGCGGCT GGCGTTTCCA GAGCCGACCC GAGATGCGCA CCTATCTCGA CCGATTGCAC 
CCCGAGAAAC CGCCGCGATA TACCCGCGCG GCGCTTGAAA CCCTGGCCAT CATTGCCTAC 
CGCCAACCCG TCACGCGCGG CGACATCGAA GAGATCCGCG GTGTGACGGT GAGCAGCCAG 
ATGCTGCGCC AGCTCGAGGA CCGCGGCTGG GTCGACACCA TCGGCTACCG CGAGGCGCCG 
GGGCGTCCCG CCTTGTTGGC AACGACACGG CAATTTCTCG ATGACCTGGG GCTGAAGTCG 
CTGGACCAGC TGCCCCTGCT CGATGCGGCG CTGCCGAGTG CCGCCGGCAA TGCCCAGGCC 
TTGCCGATAC AACCTTCCTT GCTCGATGCG CTGGAGCGCG ATCTCGCGCC GAGCGATGTT 
CCACTTTCTT CCGAGGCCTG A
 
Protein sequence
MNTQDAKRVL ETALICAHQP LPLREMRVLF DGEIGADTLR HLLDELGRDW RDRGVELVCV 
ASGWRFQSRP EMRTYLDRLH PEKPPRYTRA ALETLAIIAY RQPVTRGDIE EIRGVTVSSQ 
MLRQLEDRGW VDTIGYREAP GRPALLATTR QFLDDLGLKS LDQLPLLDAA LPSAAGNAQA 
LPIQPSLLDA LERDLAPSDV PLSSEA