| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2865 |
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| Symbol | |
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| ID | 6159966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3153805 |
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| End bp | 3154968 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665644 |
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| Product | outer membrane assembly lipoprotein YfgL |
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| Protein accession | YP_001791895 |
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| Protein GI | 171059546 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC ACGCCACGGC ACGACCGCAG GTCGGGCGCA GCGCGCCGGC GCGTCGCTGG
GTGCTGGCGT GGGCCGGGCT GGGCCTCGCC GCGCTGGCGG CGTGTTCGTC ACCGAGCAAG
CCGACGCCGG CCCCGCTCGA GGCCGTGACG GCCAAGATCG CCGGCAAGCA GATCTGGCGC
CAGAGCCTGG GTGAGCCGGT GGCGGCGCTG TCGGTGGCCG TGGTCGGCGA CCGGTTCGTG
CTCGCCAGCC GCGACGGCGT GGTGCTCAGC TACGACGTCG CGACCGGTGC CGAACGCAGC
CGCGTCGCGC TGGGCGTCAA GCTGTCGGCG GGGGTCGGCA GCGATGGCCG CTACAGCGCG
GTCGTCAGCG ACAACAACGA CCTGGTGCTG ATCGACGGCG CCAAGGAGCG CTGGCGCATC
CGCCTGTCGT CGCGGGTCGT CACGGCGCCG CTGGTGGCGG GCGAGCGGGT CTTCATCCAG
ATGGTCGATC GCACCATCCA GGCCTACGAC GTGCTCGATG CCCGCCGGCT CTGGAGCCTG
GCGCGCAGCG GCGAGCCGCT GGCGCTGGCG CAGGCCGGCC TGCTGCTGCC CTACAAGGAC
ACGCTGCTGG CGGGCCAGGG GTCGCGGCTG GTGGCGATCG ACCCGCTGAC GGGCTCGGTG
CGCAACGAGG TCGGCCTGCC GGCGCAGCGC GGCACCAACG AGGTCGAACG CCTGGCCGAC
CTGGTCGGGC CGGCGGCGCG GGTGGGCGAC GTGGTCTGCG CGCGCGCTTT CCAGTCGTCG
GTCGGCTGCA TCCAGGTCGA GCGTGCCGTG TCGGTCTGGA CCCGCACCTT CGGCGGTTAC
CAGGGCCTGG CGGCCGATGC CGACTTCGTC TTTGCCGCCG ATGGCAGCGA CCGCATCAGC
GCCTGGAAAC GCGCCAGCGG CGACATCGCC TGGACCAGCG AGCGGCTGCG CAACCGCGGC
CTGAGCGCGC CGCTGGTGAG CGGCAGCACC GTGGTCTTCG GCGATTTCGA AGGCTGGCTG
CACTTCCTCA GCCGCGATCG CGGCGAAACC CTTTTACGCC TGCCCACCGA CAGCAGCGGC
ATCGCCGCGC CGCTGGTGCG CTCGGGCCAG ACCCTGCTGG CGGTGTCGCG GTCGGGGGGC
GTCTACGCCT TCCGCCCGCA ATGA
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| Protein sequence | MSAHATARPQ VGRSAPARRW VLAWAGLGLA ALAACSSPSK PTPAPLEAVT AKIAGKQIWR
QSLGEPVAAL SVAVVGDRFV LASRDGVVLS YDVATGAERS RVALGVKLSA GVGSDGRYSA
VVSDNNDLVL IDGAKERWRI RLSSRVVTAP LVAGERVFIQ MVDRTIQAYD VLDARRLWSL
ARSGEPLALA QAGLLLPYKD TLLAGQGSRL VAIDPLTGSV RNEVGLPAQR GTNEVERLAD
LVGPAARVGD VVCARAFQSS VGCIQVERAV SVWTRTFGGY QGLAADADFV FAADGSDRIS
AWKRASGDIA WTSERLRNRG LSAPLVSGST VVFGDFEGWL HFLSRDRGET LLRLPTDSSG
IAAPLVRSGQ TLLAVSRSGG VYAFRPQ
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