| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2863 |
|---|
| Symbol | |
|---|
| ID | 6159964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3152113 |
|---|
| End bp | 3152355 |
|---|
| Gene Length | 243 bp |
|---|
| Protein Length | 80 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641665642 |
|---|
| Product | RNA chaperone Hfq |
|---|
| Protein accession | YP_001791893 |
|---|
| Protein GI | 171059544 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACA AAGGGCAATT GCTACAAGAC CCGTTTCTGA ACCTGCTGCG CAAAGAGCAT
GTGCCGGTCT CGATCTATCT GGTCAACGGC ATCAAGCTGC AAGGCCACAT CGAGTCGTTC
GACCAGTACG TCGTCCTGCT GCGCAACACG GTCACGCAAA TGGTCTACAA GCATGCAATT
TCCACTGTGG TCCCGGGTCG CCCCGTGAAT TTCCACGCCA CCGAAGCCCA GGACTCCAAC
TGA
|
|---|
| Protein sequence | MSNKGQLLQD PFLNLLRKEH VPVSIYLVNG IKLQGHIESF DQYVVLLRNT VTQMVYKHAI
STVVPGRPVN FHATEAQDSN
|
|---|
| |