| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2860 |
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| Symbol | |
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| ID | 6161860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3148601 |
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| End bp | 3149488 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641665639 |
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| Product | HflC protein |
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| Protein accession | YP_001791890 |
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| Protein GI | 171059541 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC TGGGACTGAT TGTCGTCGGC ATCCTGCTGG TGCTGATGAC CGCGATGTCG
ACCCTCTTCG TGGTCGACCA ACGTAACTTT GCCGTTGTCT ATTCACTCGG TGAGATCAAG
GAAGTGATCA CCGAGCCGGG CCTGAAGTTC AAGCTGCCGC CGCCGCTGCA GAACGTGATC
TTTCTCGATC GCCGCACCCA GTCGCTCGAC AGCCCGGAAA CGCGCCCCAT CTTCACGGCG
GAAAAGCAGA GCCTGGTGAT CGACTGGCTG GTCAAGTGGC GCGTGGTCGA TGCCCGCCAG
TTCATCCGCA ACACCGGCAC CGATCTTCGC AATGCCGAAG CCCGCTTGTC GCCGATCGTG
CAGGCGGCGA TGAACGAGGA AGTCACCAAG CGCAGCGTGC GTGCGATGTT GTCGGGTGAG
CGCGATCGTG TCATGCAGGG CGTGCTTGCC CGCCTGGGTG ACGACGCCAA GAACTTCGGC
ATCGAGGTGG TGGATGTGCG GATCAAGCGT GTCGACTTCG CTTCGTCGGT GACCGAGTCG
GTCTATCGCC GCATGGAGTC CGAACGCAAG CGTGTGGCCA ACGAGTTGCG GTCGGAAGGG
TCGGCCGAAG GCGAGAAGAT CCGCGCCGAT GCCGATCGCC AGCGCGAAAT CGTGCTTGCC
GAAGCCTATC GTGATGCGCA GAAGATCAAG GGCGAGGGCG ATGCGAAGGC ATCGGCGCTG
TATGCCGAGT CATTCGGCCG CGATCCGCAG TTCGCGCAGT TCTATCGCAG CCTCGAGGCC
TATCGGGCGA GCTTTCGCAG CAAGAGCGAC GTGATCGTGG TCGATCCGAG CAGCGATTTC
TTCCGGGCCA TGCGTGGCGG CGCTGCCGCG CCTGCGCCAC GCAAGTAA
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| Protein sequence | MNRLGLIVVG ILLVLMTAMS TLFVVDQRNF AVVYSLGEIK EVITEPGLKF KLPPPLQNVI
FLDRRTQSLD SPETRPIFTA EKQSLVIDWL VKWRVVDARQ FIRNTGTDLR NAEARLSPIV
QAAMNEEVTK RSVRAMLSGE RDRVMQGVLA RLGDDAKNFG IEVVDVRIKR VDFASSVTES
VYRRMESERK RVANELRSEG SAEGEKIRAD ADRQREIVLA EAYRDAQKIK GEGDAKASAL
YAESFGRDPQ FAQFYRSLEA YRASFRSKSD VIVVDPSSDF FRAMRGGAAA PAPRK
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