| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2853 |
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| Symbol | |
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| ID | 6162605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3140519 |
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| End bp | 3140980 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665631 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791883 |
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| Protein GI | 171059534 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.140005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC CGTCCGACGT CATTCTCGAC ACCAACGCTG TACTCGACTG GCTGGTGTTC
GCCGAACCCG CAGCCCAGCC GCTCGGCGAC GCGGTACGCC GCGGCGCGCT GCGCTGGATC
GCCACCCCCG ACATGCGAGT CGAGCTGCAC GACGTGCTCG GCCGGCTCCT GACCCACCCG
CCACTGCAAC GCTGGCAGGC CGCCCATGCG CCGGCGCACG CCGAAGTCGA GCGCTGGATC
CGGTTGGTCG ACACGCCCGC GCCGCTGTCG GCGGCGCTGC GCCTGCATTG CACCGACCCG
GACGACCAGG GCTTCATCGA CCTGGCGCTG GCCCGCCGCA CGCCGTGGCT GGTCACCCGC
GACCGCGCGC TGCTGCGCCT GGCTCGTGGC GCCCGGCCGC ATGGCGTGGC GGTGCTGACG
CCCGCCCAGT GGAGCGCCAC GGCCGCCGCC GGGCTGGTCT GA
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| Protein sequence | MNPPSDVILD TNAVLDWLVF AEPAAQPLGD AVRRGALRWI ATPDMRVELH DVLGRLLTHP
PLQRWQAAHA PAHAEVERWI RLVDTPAPLS AALRLHCTDP DDQGFIDLAL ARRTPWLVTR
DRALLRLARG ARPHGVAVLT PAQWSATAAA GLV
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