| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2851 |
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| Symbol | |
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| ID | 6162603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3137914 |
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| End bp | 3139155 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665629 |
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| Product | amidase |
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| Protein accession | YP_001791881 |
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| Protein GI | 171059532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.15292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCG ACGCGGAAGG TTCGCGCCAG GCGGCCGCCG CGGCCGATCG AGCCCTCCTT
GAAGGCCGCG ACGCCGGCGT GCTGTGCGGC CTGGCGGTCA GCATCAAGGA TCTGTTCGAC
GTCCAGGGCC AGCCCACCCG AGCCGGCTCG ACCTGGCTCG GCGCCGATCA ACCGGCCCGG
GCCGATGCCC CCGCCGTGGC GCGCCTGCGC AAGGCCGGCG CAGCGCTCGT CGGACGCACG
CAGATGACCG AGTTCGCCTT TTCGGGCGTG GGCATCAACC CGCACAGCGG CACGCCGGCC
AATGCCGCGA TGGCAGCGCT CGGGCGGCCC GATTGTGTGC CCGGCGGATC GACCTCCGGC
GGCGCCGTGT CGGTCGCCTG CGGCGCGGCC TGGGCGGCAC TCGGCAGCGA CACCGGCGGC
TCGATCCGCA TTCCCGCGGC ACTGCACGGC CTGGTCGGCT ACAAGAACAC CCAGGCCCTG
ACGCCGCTGC ACGGCAGCGT GCCGCTGGCG CCCAGCATGG ACACCGTCTG CGCCGTCACC
CGCAGCGTGC GCGACGCCGT GCTGCTGCAC CAGGTGCTGG CGCAGCGTCG CGTCGCCCTG
GCCGGGCGGA CGTTGTCGAA CCTGCGGCTG GGCTGGATCC GCAACCACTT TCTGGACGGC
CTCGATGCCG AGGTCGCACA GGCCTTCGAG GCCAGCCTCG GCACGCTCGC CGCGGCTGGC
GTGCAGCTGA AGGAACTCCG CGTGGACGCC CTCGCCGAGC TGCCGGCGCT GACCGAACAG
GGCGGCATCA CCGCAGCCGA AGCCTGGGCC TGGCACGCGC CGCACCTGGC GGCGCACGGC
CACGAATATG ACCCGCGCGT GCTCGGGCGC ATCCGCCGGG GTGCGTCGAT CTCGGCCGAG
CAGCTCGCTG CATTGCATCA ACGCCGCCGC GCCTGGATCA CGCGCATGGA AGCGGCGCTG
GCCGACGTCG ACCTCGTGCT CAGCCCCACC GTGCCGCTGA TCGCCCCGGC GATGGCGCCG
CTGCTGGCCA GCGACGACGA ATTCTTCCGC GTCAACGCGC TGCTGCTGCG CAACCCCGCC
GTCGTCAACC TGCTCGACGG CTGCGCGATC ACGCTGCCTT GCCACACGCA AAGCCAGCCC
CCCGTCGGGC TGATGCTGTG GGCGCCAGGC GGGCGTGACG ATCTGCTGCT CGACGCCGCC
GGCGCGGTCG AAGCCGCCTT GCAACCGCAG CGGGGCGCCT GA
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| Protein sequence | MAVDAEGSRQ AAAAADRALL EGRDAGVLCG LAVSIKDLFD VQGQPTRAGS TWLGADQPAR
ADAPAVARLR KAGAALVGRT QMTEFAFSGV GINPHSGTPA NAAMAALGRP DCVPGGSTSG
GAVSVACGAA WAALGSDTGG SIRIPAALHG LVGYKNTQAL TPLHGSVPLA PSMDTVCAVT
RSVRDAVLLH QVLAQRRVAL AGRTLSNLRL GWIRNHFLDG LDAEVAQAFE ASLGTLAAAG
VQLKELRVDA LAELPALTEQ GGITAAEAWA WHAPHLAAHG HEYDPRVLGR IRRGASISAE
QLAALHQRRR AWITRMEAAL ADVDLVLSPT VPLIAPAMAP LLASDDEFFR VNALLLRNPA
VVNLLDGCAI TLPCHTQSQP PVGLMLWAPG GRDDLLLDAA GAVEAALQPQ RGA
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