Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2850 |
Symbol | |
ID | 6162602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3136874 |
End bp | 3137620 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641665628 |
Product | ribosomal protein S2 |
Protein accession | YP_001791880 |
Protein GI | 171059531 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.274359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCA CGATGCGCGA AATGCTGGAA GCCGGTGTCC ACTTCGGTCA CCAAACCCGC TTCTGGAACC CCAAGATGGC CCCGTATATC TTCGGCCATC GCAACAAGAT CCACATCATC AACCTCGAGA AGACGGTTCC GCTCTTCAAC GAGGCGACCA AGTACGCACG CCAGCTCGCA GGCAAGCGCG GCACCATCCT GTTCGTCGGC ACCAAGCGCC AGGCGCGTGA CGTCGTGGCG ATGGAAGCCG CACGCGCGGG CATGCCGTTC GTCGAGACCC GCTGGCTCGG CGGCATGCTG ACCAACTTCA AGACCGTCAA GGGTTCGCTG AAGAAGCTCA AGGAAATGCA GGCCCAGGTC GAGGCCGGCA CCCAGCCCGC GATCAAGAAG GAAGCGCTGA TGTTCCAGCG CGAGATCGCC AAGCTCGAGA AGGACATCGG CGGCATCCAG GACATGAACG CGCTGCCTGA CGCGCTGTTC GTGATCGACG TCGGTTTCCA CAAGATCGCG ATCGCCGAAG CCAAGAAGCT CGGCATCCCC GTGATCGGCG TGGTCGACAC CAACCACTCG CCGGTCGGCA TCGACTACGT CATCCCCGGC AACGACGACT CGGCCAAGGC GGTTGCGCTG TACGCCCGTG TCATGGCCGA CGCGATCATC GAAGGCAAGG CCAACTCGCT CAATGAAGTG GTCGAGGCTG CCGCCGGCGC CAGCGACGAG TTCGTCGAGG TCAGCGACCC CGCCTGA
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Protein sequence | MSFTMREMLE AGVHFGHQTR FWNPKMAPYI FGHRNKIHII NLEKTVPLFN EATKYARQLA GKRGTILFVG TKRQARDVVA MEAARAGMPF VETRWLGGML TNFKTVKGSL KKLKEMQAQV EAGTQPAIKK EALMFQREIA KLEKDIGGIQ DMNALPDALF VIDVGFHKIA IAEAKKLGIP VIGVVDTNHS PVGIDYVIPG NDDSAKAVAL YARVMADAII EGKANSLNEV VEAAAGASDE FVEVSDPA
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