| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2849 |
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| Symbol | tsf |
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| ID | 6162601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3135854 |
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| End bp | 3136774 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665627 |
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| Product | elongation factor Ts |
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| Protein accession | YP_001791879 |
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| Protein GI | 171059530 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0264] Translation elongation factor Ts |
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| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.638263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA TTACTGCCAA GATGGTGGGC GACCTGCGCG CCAAGACCGA CGCCCCGATG
ATGGAATGCA AGAAGGCCCT CACCGAGGCC GACGGCAACA TGGAAAAGGC CGAAGAGCTG
CTGCGCGTCA AGCTCGGCAA CAAGGCCAGC AAGGCCGCGT CGCGCGTGAC CGCCGAAGGC
GTCGTCGCCT CGGCCGTGTC GGGCTCGACC GGCGCCCTGA TCGAAGTCAA CTGCGAAACC
GACTTCGTCT CCAAGAACGA CTCGTTCCTG GCCTTCGTGC AGGCCTGTGT CAATCTGGTC
GTCGAGCACA ACCCGGCCGA CGTGGCTGCG CTGTCGGCGC TGCCGCTGGC GATGGAAGAC
TTCGGCCCGA CGGTCGAGGA CGTGCGCAAG GGCCTGATCG GCAAGATCGG CGAGAACCTG
GCGATCCGCC GCTTCAAGCG TTATGGCGAC GGCGGCAGCC TCGCGCATTA CCTGCACGGC
GTGCGCATCG GCGTGATGGT CGAGTACAGC GGTGACGCGG TCGCCGCCAA GGACGTGGCG
ATGCACATCG CCGCCATGAA GCCGGTCTCG CTGACCTCGG CCGACGTGTC CGCCGACCTG
ATCGAGAAAG AGCGTGCCGT TGCGGCCGGC AAGGCTGCCG AAGATGCCAA GGCCGCCGAA
GCGGCCGGCA AGCCGGCGCA GTCGGCCGAG ATCGTCGCCA AGCGCATCGA AGGCTCGATC
CAGAAGTTCC TGAAGGAGGT CTCGCTGTTC AACCAGACCT TCGTCAAGAA CGACAAGCAG
ACGGTCGAGC AGATGCTCAA GGCTGCCGGC ACCACGGTGA AGGGCTTCAC CATGTACGTG
GTGGGCGAAG GCATCGAGAA GAAGCAGGAC GACTTCGCGG CCGAAGTGGC GGCTCAGGTC
GCTGCTGCCA AGGGTCAGTG A
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| Protein sequence | MATITAKMVG DLRAKTDAPM MECKKALTEA DGNMEKAEEL LRVKLGNKAS KAASRVTAEG
VVASAVSGST GALIEVNCET DFVSKNDSFL AFVQACVNLV VEHNPADVAA LSALPLAMED
FGPTVEDVRK GLIGKIGENL AIRRFKRYGD GGSLAHYLHG VRIGVMVEYS GDAVAAKDVA
MHIAAMKPVS LTSADVSADL IEKERAVAAG KAAEDAKAAE AAGKPAQSAE IVAKRIEGSI
QKFLKEVSLF NQTFVKNDKQ TVEQMLKAAG TTVKGFTMYV VGEGIEKKQD DFAAEVAAQV
AAAKGQ
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