| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2846 |
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| Symbol | |
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| ID | 6162663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3133657 |
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| End bp | 3134430 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665624 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001791876 |
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| Protein GI | 171059527 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA CGACAAGCAA GGTGACCGAT CTGACCTCAT CCCTGCCACG CCACGTTGCC
ATCGTCATGG ATGGCAACGG CCGCTGGGCC AACCGGCGCC TGATGCCGCG TGTGGTCGGC
CACAAGTTCG GTGTCGATGC GCTGATCCGC ATCATCAATG CCTGCGCCGA TCGCGGCATC
GGCCATCTGA CGGTGTTCGC GTTTTCGTCC GAAAACTGGA ACCGGCCGCA GGAGGAGGTC
TCCGGGCTGA TGAACCTGGT GCTGGTGGCG GTCTCGAAGT ACCTCGCCCG CATGGCCGAG
GACGGCGTGC GCATCCGCAT CATCGGCGAC CGTGCCGAGG TGTCGCAGAA GGTGCGCACC
GCCTGGGACG AGGCCGAGCG ACTGACCGAG AACAACCGCC GCATCACCGT GTCGGTGGCG
TTCAACTACG GCGGCCGCTG GGACGTGGTG CAGGCCTGCC GCGCGCTGGT GGCCTCGGGG
GTCACCGCCG ATCAGATCGA CGAGGCGGCG CTGTCGCGCC ACATGTCGCT GGCGTACGCG
CCGGACCCCG ACTTCTTCAT CCGCACAGGC GGTGAGGTGC GGATCTCCAA TTTCCTGCTC
TGGCAGGCGG CTTATTCCGA GCTGTATTTC ACCGATTGCC TCTGGCCCGA CTTCGACGAG
CGTGCGCTCG ACGCAGCGCT GGCCGACTAC GCCTCGCGCG ACCGCCGCTT CGGCCGTGTC
AAGACCGATG TGACGCCCGA CGGCCAGCGC ATCGCCTTGG CGCCTGACCG CTGA
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| Protein sequence | MSSTTSKVTD LTSSLPRHVA IVMDGNGRWA NRRLMPRVVG HKFGVDALIR IINACADRGI
GHLTVFAFSS ENWNRPQEEV SGLMNLVLVA VSKYLARMAE DGVRIRIIGD RAEVSQKVRT
AWDEAERLTE NNRRITVSVA FNYGGRWDVV QACRALVASG VTADQIDEAA LSRHMSLAYA
PDPDFFIRTG GEVRISNFLL WQAAYSELYF TDCLWPDFDE RALDAALADY ASRDRRFGRV
KTDVTPDGQR IALAPDR
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