Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2831 |
Symbol | |
ID | 6161585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3116304 |
End bp | 3118415 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665609 |
Product | Na+/solute symporter |
Protein accession | YP_001791861 |
Protein GI | 171059512 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC GTCGAGGCGG CCAGATCCGG CCGACCCAGG CCACGCGCGT CTTCACCCAT GTGCTGCACC GGCGCTATGC CGCGTACACC GTGGGCGTGC TCTGCTTCAT CGTGTTGATG GCGCTCCTCG AGCGCATGGG CTGGCCGCGC ACCTGGATCG GCGGCACCTT CCTGATCGGC ACGGTGGCGG TCTATGCGGC GATCGGCCTG ATGTCGCGCA CCACCGACGA GTCCGAGTAC TACGTCGCCG GGCGGCGCGT GCCTGCCATC TACAACGGCA TGGCCACGGC AGCCGACTGG ATGTCGGCCG CGTCCTTCAT CGGCACTGCC GGCGTGCTGT ACCTGCAGGG CTTTGCGGGT CTGGCCTACA TCCTCGGCTG GACCGGCGGT TACTGCCTGG TGGCGCTGCT GCTCGCGCCC TATCTGCGCC GGGTCGGCTA CTTCACGGTT CCCGAGTTCC TCGGCGCCCG CTATGGCGGC GTGCTGCCGC GCATCGTGGG CGTGGCTGCG GCCGTGCTGG TGTCGTTCGT CTACGTGGTG GTGCAGATCT ACGGCGTGGG GCTGATCACG TCGCACCTGA CCGGTTTCAG TTTCGAGATC GGCATCTTCG TCGGCCTGGG TGGCGTGCTG GTGTGCTCGT TCCTGGGCGG CATGCGGGCG GTGACGTGGA CGCAGGTGGC GCAGTACATC GTGCTGATCC TGGCCTATCT GACGCCCGTG TTCTGGCTCT CGATGAACCA GACCGGCAGT CCGTTCCCGC TCTTTTCATA CGGGCAGCAG CTTCAGCAGG TGGGCCTGCG CGAACAGGCG CTGCTGCACG ATCCGCGTGA GCTGCAGGTG CGCAACCAGC TGCAGGTGCG TGCCGACGAC GCCCGGCGCA AGCTGGCCGA CGTGCCGCAG GCCATGATCG ACGACGCCGA AACCATGGCC GCCCAGGTGC GCGCGCTGCA GGCGGCCGAG GCGCCGTTGG CGCGCATCCA GCAGGCCGAG CGCAAGCTGG CGACACGGCC TCACACGATC GACGAGGCGC GGGTCGTCTA TCAGCGCGAA ATGGACCAGT CGGCCTTGCG GGCGTTGCCG CTGGCAGGCA TGCCGCCGCA GGCCCAGCCC TATCCGGATT CGGGGGCGGC GAAAGCGGAT CAAGCGCCCG GTGCGGCACG ACGGAATTTC CTGGCACTGG TGCTGTGCCT GATGCTGGGC ACGGCCGCCA TGCCGCATGT GCTGACGCGC TACTACACCA CGCCGTCCGT CACCGAGACA CGCAAGTCGG TGGCCTGGTC TCTGTTCTTC ATCGCGTTGC TCTACATGGC GGCACCGGCG CTGGCCGCCA TGGTGAAGTA CGAGGTCTTC ACCAATCTGA TCGGCACGCC TTTCGATCAG CTGCCCGGCT GGATCCGGCG CTGGTCCAAG CTGGATCCGT CGCTGGTATC GGTCGAGGAC ATCAATGGCG ACGGCCTGCT GCAGCTGGCC GAGTTGCGCC TGGCCGGCGA CGTCATCGTG CTGGCCGCCC CCGAGATCGG CGGCCTGCCG CTGGTGGTGA CCTACCTGGT CGCGGCGGGC GGATTGGCCG CGGCGCTGTC GACCGCCGAC GGGCTGCTGC TGACGATCTC CAACGCCTTG TCGCACGACC TGTATTTCGG CTTCGTCAAC CCGCGGGCGC CGGCGATGCG GCGCGTCATG CTGTCGAAGT TCCTGGTACT GGTGATCGCC TTGCTGGCCG CGTTCATCGC GTCGATGCGG TTTGCCGACA TCCTGCAGTT CGTGACGGCC GCGTTCTCGC TCGCGGCCGC GGGGTTCTTT CCGGCCCTGG TGCTGGGCAT CTTCTGGCGG CGCGCCAACC GATCCGGGGC GACGCTGGGC ATGCTCTCGG GGCTGGGTGT GTGCCTGTAC TACATGATCA CGACGCATCC GCGCTTGCGT GATCTGTTCG GAATCGGCAT GCCGATCGAT CAGGCCCGCT GGTGGGATGT GGATCCGGCC GCCGCCGGGG TCTTCGGCGT GCCGGTCGGC GCCGCCGTGA TGTTCGTGGC GAGTCTGCTG ACGCCCGGCC CCGGACCGGC CGAACTGGCG ATGGTCGACC GCCTGCGCGA CCCGGGCCGA GAGTCCGACT GA
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Protein sequence | MAERRGGQIR PTQATRVFTH VLHRRYAAYT VGVLCFIVLM ALLERMGWPR TWIGGTFLIG TVAVYAAIGL MSRTTDESEY YVAGRRVPAI YNGMATAADW MSAASFIGTA GVLYLQGFAG LAYILGWTGG YCLVALLLAP YLRRVGYFTV PEFLGARYGG VLPRIVGVAA AVLVSFVYVV VQIYGVGLIT SHLTGFSFEI GIFVGLGGVL VCSFLGGMRA VTWTQVAQYI VLILAYLTPV FWLSMNQTGS PFPLFSYGQQ LQQVGLREQA LLHDPRELQV RNQLQVRADD ARRKLADVPQ AMIDDAETMA AQVRALQAAE APLARIQQAE RKLATRPHTI DEARVVYQRE MDQSALRALP LAGMPPQAQP YPDSGAAKAD QAPGAARRNF LALVLCLMLG TAAMPHVLTR YYTTPSVTET RKSVAWSLFF IALLYMAAPA LAAMVKYEVF TNLIGTPFDQ LPGWIRRWSK LDPSLVSVED INGDGLLQLA ELRLAGDVIV LAAPEIGGLP LVVTYLVAAG GLAAALSTAD GLLLTISNAL SHDLYFGFVN PRAPAMRRVM LSKFLVLVIA LLAAFIASMR FADILQFVTA AFSLAAAGFF PALVLGIFWR RANRSGATLG MLSGLGVCLY YMITTHPRLR DLFGIGMPID QARWWDVDPA AAGVFGVPVG AAVMFVASLL TPGPGPAELA MVDRLRDPGR ESD
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