| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2828 |
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| Symbol | rpsR |
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| ID | 6161582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3115174 |
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| End bp | 3115458 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641665606 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001791858 |
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| Protein GI | 171059509 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCCGC CACGTGGTAA GTTTTCCAAA GACCGCAAGA CCAAGCGCAA CCAGCAGTCC
CTGCTGTTCA AGCGCAAGCG TTTCTGCCGC TTCACCGTCA CCGGCGTCAA AGAGATCGAT
TACAAGGATC TCGACGTGCT GCGCGACTTC GTCGGTGAGA ACGGCAAGAT CACGCCGGCT
CGCCTGACCG GCACCCGTGC GTTCTTCCAG CGCCAGCTGA CGACCGCGAT CAAGCGTGCG
CGCTTCCTGG CTCTGCTGCC GTACAGCGAC CAGCACAAGG TCTGA
|
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| Protein sequence | MPPPRGKFSK DRKTKRNQQS LLFKRKRFCR FTVTGVKEID YKDLDVLRDF VGENGKITPA
RLTGTRAFFQ RQLTTAIKRA RFLALLPYSD QHKV
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