| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2818 |
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| Symbol | |
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| ID | 6161659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3104792 |
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| End bp | 3105490 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641665596 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_001791848 |
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| Protein GI | 171059499 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA ATACAAAAAG CAAGAAAGTC AACAAGGCTT GGTTCAACGA CCACATCCAC
GATACCTATG TGAAGCTGGC GCACAAGGAG GGATATCGCT CTCGTGCCGC CTACAAGATC
AAGGAGATCG ACGAGACCTG TGGCCTGATC AGGCCTGGTC AGGTGGTGGT CGACCTCGGG
GCCGTCCCGG GCGCCTGGAG CCAGTACGTC CGGCGCCGGT TTGCGCCACG CGAGGCGGGT
GTCGGCGGGG CTGCGGCCGG TGAACTCAAT GGTCGGATCA TCGCCCTCGA CCTGCTGCCG
TTCGAACCGC TGGAGGGGGT GGCGTTCTTG CAGGGCGACT TCTGCGAAGA GGCCGTGCTT
GCGCAACTGG TGGGCTTGCT CGATGGCCGC GCGGTGGACG TCGTGTTGTC CGACATGGCG
CCGAACCTGT CGGGCGTCGA GGTCACCGAT GCTGCGCGCA TCGCCAATCT GGTCGAACTG
GCGCTCGAGT TCGCCCAGAG TCACCTGAAG CCGCAGGGGG CCCTCGTGTG CAAGGTCTTC
CATGGCAGCG GCTACAGCCA ACTGGTCGAC CAGTTCAAGC GCACGTTCAG GGTCGTCAAG
GCAGTGAAGC CGAAGGCTTC ACGTGACAGG TCGGCTGAAA CTTTTCTGGT CGGCATCGGT
CTGAAATCGA CTGGCATGCC AAATGCCGAT GCGGTGTGA
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| Protein sequence | MKINTKSKKV NKAWFNDHIH DTYVKLAHKE GYRSRAAYKI KEIDETCGLI RPGQVVVDLG
AVPGAWSQYV RRRFAPREAG VGGAAAGELN GRIIALDLLP FEPLEGVAFL QGDFCEEAVL
AQLVGLLDGR AVDVVLSDMA PNLSGVEVTD AARIANLVEL ALEFAQSHLK PQGALVCKVF
HGSGYSQLVD QFKRTFRVVK AVKPKASRDR SAETFLVGIG LKSTGMPNAD AV
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