Gene Lcho_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2811 
Symbol 
ID6161852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3096489 
End bp3097274 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID641665589 
Productphosphate ABC transporter, ATPase subunit 
Protein accessionYP_001791841 
Protein GI171059492 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA AGGTCGATCC CAGCGTGAAC GTCAAGACCA AGGTCGCGGT GCGCGACCTG 
AACTTCTACT ACGGCCACTT TCACGCCCTG AAGAACATCA ACCTCGACAT CCCGGAGAAG
AAGGTCACCG CCTTCATCGG GCCGTCGGGC TGCGGCAAGT CGACGCTGCT GCGCACCTTC
AACCGCATGT TCGAGCTCTA CCCGGAGCAG CGCGCCGAAG GCCAGATCCT GCTCGACGGC
CAGGACATCC TGAAGAGCCG CGAAGACGTC TCGCTGATCC GCGCCCGCGT CGGCATGGTG
TTCCAGAAGC CGACGCCGTT CCCGATGTCG ATCTACGACA ACATCGCCTT CGGCGTGCGG
CTGTTCGAGA ACCTGCCGCG CGTCGAGATG GACGATCGTG TCGAGTGGGC GCTCAAGAAG
GCGGCGCTGT GGGGCGAGGT CAAGGACAAG CTCGACAAGA GCGGCGCCGG CCTGTCGGGG
GGCCAGCAGC AGCGCCTGTG CATCGCGCGC GGCATCGCGA TCAAGCCCGA GGTGCTGCTG
CTCGATGAAC CCTGTTCGGC ACTCGACCCG ATCTCGACGG GCAAGATCGA GGAGCTGATC
GACGAGCTCA AGGGCGACTA CACGGTGGTC ATCGTCACGC ACAACATGCA GCAGGCGGCG
CGCAGCTCCG ACTACACCGC CTACATGTAC CTCGGCGACC TGATCGAGTT CGGCGACACC
AACGACATCT TCATGCGCCC GCAGCGCAAG GAGACCGAGG ACTACATCAC CGGCCGCTTC
GGCTGA
 
Protein sequence
MDAKVDPSVN VKTKVAVRDL NFYYGHFHAL KNINLDIPEK KVTAFIGPSG CGKSTLLRTF 
NRMFELYPEQ RAEGQILLDG QDILKSREDV SLIRARVGMV FQKPTPFPMS IYDNIAFGVR
LFENLPRVEM DDRVEWALKK AALWGEVKDK LDKSGAGLSG GQQQRLCIAR GIAIKPEVLL
LDEPCSALDP ISTGKIEELI DELKGDYTVV IVTHNMQQAA RSSDYTAYMY LGDLIEFGDT
NDIFMRPQRK ETEDYITGRF G